Input parameters:

  Query = ENSP00000385870 (Len=670)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSP00000385870, Len=670):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MALVLCAIGVYLHPPVQLLCCLVFLQPLQPHVRVWDSVTLSTLQIIGLGTFERGVGCLDFSKADSGVHLCIIDDSNEHML 80  
WD40-rpts      (_______________WD 1_______________)(_____________________WD 2__________________

Query       81 TVWDWQKKAKGAEIKTTNEVVLAVEFHPTDANTIITCGKSHIFFWTWSGNSLTRKQGIFGKYEKPKFVQCLAFLGNGDVL 160 
WD40-rpts      ___)   (_________________WD 3________________)(____________________WD 4_________

Query      161 TGDSGGVMLIWSKTTVEPTPGKGPKGVYQISKQIKAHDGSVFTLCQMRNGMLLTGGGKDRKIILWDHDLNPEREIEVPDQ 240 
WD40-rpts      ___________)               (_________________WD 5________________)(_____________

Query      241 YGTIRAVAEGKADQFLVGTSRNFILRGTFNDGFQIEVQGHTDELWGLATHPFKDLLLTCAQDRQVCLWNSMEHRLEWTRL 320 
WD40-rpts      ______WD 6__________________)(_________________WD 7_________________)(__________

Query      321 VDEPGHCADFHPSGTVVAIGTHSGRWFVLDAETRDLVSIHTDGNEQLSVMRYSIDGTFLAVGSHDNFIYLYVVSENGRKY 400 
WD40-rpts      ________WD 8_________________)   (_________________WD 9________________)(_______

Query      401 SRYGRCTGHSSYITHLDWSPDNKYIMSNSGDYEILYWDIPNGCKLIRNRSDCKDIDWTTYTCVLGFQVFGVWPEGSDGTD 480 
WD40-rpts      _____________WD10____________________)                         (________________

Query      481 INALVRSHNRKVIAVADDFCKVHLFQYPCSKAKAPSHKYSAHSSHVTNVSFTHNDSHLISTGGKDMSIIQWKLVEKLSLP 560 
WD40-rpts      ___WD11__________________)      (_________________WD12_________________)        

Query      561 QNETVADTTLTKAPVSSTESVIQSNTPTPPPSQPLNETAEEESRISSSPTLLENSLEQTVEPSEDHSEEESEEGSGDLGE 640 
WD40-rpts                                  (_______________WD13_______________)                

Query      641 PLYEEPCNEISKEQAKATLLEDQQDPSPSS 670 
WD40-rpts                                    

13 WD40-repeats found in QUERY=ENSP00000385870 (Len=670):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     1-36       4.24  289.63  0.00776       15.0%     34.75
  WD 2:  Seg  4    37-84       6.01  362.96  0.00080       22.5%     47.89
  WD 3:  Seg  8    88-126      7.33  417.36  0.00015       15.0%     56.57
  WD 4:  Seg 12   127-172      5.10  325.26  0.00257       17.5%     50.54
  WD 5:  Seg 16   188-226      7.61  429.07  0.00010       22.5%     51.64
  WD 6:  Seg 20   227-269      5.99  362.24  0.00082       12.5%     53.98
  WD 7:  Seg 24   270-309      9.21  495.23  1.3e-05       17.5%     57.30
  WD 8:  Seg 28   310-350      6.92  400.67  0.00025       22.5%     56.94
  WD 9:  Seg 32   354-392      7.86  439.27  7.5e-05       20.0%     58.34
  WD10:  Seg 36   393-438      8.55  467.67  3.1e-05       37.5%     53.80
  WD11:  Seg 42   464-506      6.15  368.79  0.00067        7.5%     55.56
  WD12:  Seg 46   513-552      6.90  399.80  0.00025       32.5%     49.47
  WD13:  Seg 53   589-624      4.62  305.49  0.00475       17.5%     28.98

Multiple sequence alignment of 13 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    1-36     ----------------------------MALVLCAIGVYLHP-PVQL----LCCLVFLQPLQPHVRVWD
   WD 2   37-84     SV-------T------LSTLQIIGL---GTFERGVGCLDFSK-ADSGVHLCIIDD----SNEHMLTVWD
   WD 3   88-126    -K-------A------K----GAEI---KTTNEVVLAVEFHP-TDAN----TIIT----CGKSHIFFWT
   WD 4  127-172    WSGNSLTRKQ------G----IFGK---YEKPKFVQCLAFLG-NGDV----L-TG----DSGGVMLIWS
   WD 5  188-226    -Y-------Q------I----SKQI---KAHDGSVFTLCQMR-NGML----LTGG----GKDRKIILWD
   WD 6  227-269    HD----LNPE------R----EIEV---PDQYGTIRAVAEGK-ADQF----LVGT----SRNFILRGTF
   WD 7  270-309    ND-------G------F----QIEV---QGHTDELWGLATHP-FKDL----LLTC----AQDRQVCLWN
   WD 8  310-350    SM-------E-----HR----LEWT---RLVDEPGHCADFHP-SGTV----VAIG----THSGRWFVLD
   WD 9  354-392    -R-------D------L----VSIH---TDGNEQLSVMRYSI-DGTF----LAVG----SHDNFIYLYV
   WD10  393-438    VS-------ENGRKYSR----YGRC---TGHSSYITHLDWSP-DNKY----IMSN----SGDYEILYWD
   WD11  464-506    LG-------F------Q----VFGVWPEGSDGTDINALVRSH-NRKV----IAVA----DDFCKVHLFQ
   WD12  513-552    -K-------A------P----SHKY---SAHSSHVTNVSFTHNDSHL----ISTG----GKDMSIIQWK
   WD13  589-624    -P-------P------P----SQPL---NETAEEESRISSSP-T-------LLEN----SLEQTVEPSE

   WD40 Template    TG-------E------C----LRTL---SGHTSGVTSVSFSP-DGKR----LVSG----SEDGTIKVWD