Input parameters:

  Query = ENSP00000390424 (Len=1288)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSP00000390424, Len=1288):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MSSEDLAEIPQLQKLSIPHGFQNKEAASSPTPSITLSQVPDLQPGSQLFTEIHLAKIEKMFEEDINSTGALGMDAFIKAM 80  
WD40-rpts                                                                                      

Query       81 KKVLSSVSDEMLKELFLKVDSDCEGFVTWQKYVDYMMREFQGKEDMRKSQYRLHFYLPMTVVPLNHGCEVVKVVFLIHRF 160 
WD40-rpts                                                                     (_______________W

Query      161 KKIGCFLTVTKDGILQFWSESFSLMSSFRLNQTQQLYNQPMWVIDMVCLHNMNLVAVASTRQKIDFFDISDHKCVRAFTF 240 
WD40-rpts      D 1_______________)          (_________________WD 2________________)(___________

Query      241 VDLDSCALVMDYWSDYHRGVFCYGDAKGNVIVFTSENMTSGLFNPRILPRASKWDHWIKVSLQKLLNEKSALHRSYRLKA 320 
WD40-rpts      _____WD 3_______________)                                               (_______

Query      321 LHPNWCEQVKFIPQMNVVVSCSAIEKSSLVLTILPAKASKKPRLSVLRLRKGILCFDYCPDRNFLVTGGYDAFIRLWNPF 400 
WD40-rpts      __________WD 4_________________)  (___________________WD 5___________________)  

Query      401 VSKRPVWLMKGHQTSVTHILVDSRNNSILISVSKDKNIRVWDMLDYICLQSFCGKFFALGNCPITSAYFFEKDNTLICST 480 
WD40-rpts        (_________________WD 6_________________)   (____________________WD 7__________

Query      481 YSIGILKGYLEAQGLIKARKRTTHCSPLCAVLYSKIFKQVVSGCLRGTVSVWEVVTGRKTMEFAVSGGQHVEMTAMALDE 560 
WD40-rpts      _________)(___________________WD 8__________________)      (_________________WD 

Query      561 SERCLLTGLRDGTMKMWNYNIGKCLLTFPSPEQLEISGIIHMNKVFYVTGWSKRITHFLFHKTKPVLLCYHWQTYHTEDI 640 
WD40-rpts      9________________)   (_________________WD10________________)(___________________

Query      641 LSMAKYRNQFLGTSSYSGDILFWNTGTLKPIFNFNASRSPSPLQPKRVQDVNNCLAESHRPSRPYVEREKWTYKTSRKLS 720 
WD40-rpts      WD11___________________)(_________________WD12________________)              (__

Query      721 SLSPESVANTNLRRSLVSAPPVMRCPRDKEPDRPVPQQKPSSASGTSRQSSKIHSKQSIYKEDETRKGEWQKNMLVQSSA 800 
WD40-rpts      ________________WD13__________________)                                      (__

Query      801 SVEKIIFLQTRPRLPHTAALLSSCMDGYIYAWSLHENGGLLGKFPVDLDNGDVVVGAMATDKNDWILITGDCKGYIKIWD 880 
WD40-rpts      _____________WD14_______________)        (_________________WD15________________)

Query      881 IKDYCALIDKQPFQSSGAKVVSEAHNKFRLLIPQQLGTNFPHYIPLEDKEVVAGHTISLVPPTLLMTWKGHLNSVADILY 960 
WD40-rpts      (______________WD16_____________)                            (_________________W

Query      961 VDNFQLVISAGQDRDVKAWKLSGDAIGTFGLSVWKRLQDACDGPRENRASLEEDGDSTGTTQKVLHLELQEQRDLAEALI 1040
WD40-rpts      D17________________)        (________________________________WD18_______________

Query     1041 YQRREQAALMALLHGKADKEADTWAKLQKMALMSPWAGERPLEDIEDSWNKWESRDKQVSKVLGAAYKPKERLQNTRFLS 1120
WD40-rpts      _________________)                                                              

Query     1121 TRVPYGWMKHQISPQVYQSLHFSDLMPTQQPDFLTSRGPDQQDQHIRLVAHHVQKDLVPSREQAVLDTTDSTPAAASSPS 1200
WD40-rpts                                                                                      

Query     1201 SLLSVTASASRLLDSSLPTFLTPQFSFLLRPQSASTAHSTPSVPSPVSKSTLQGSVTPKHIVSSFERPPRPLKATFMSSV 1280
WD40-rpts                                                                                      

Query     1281 KGSSHVRF 1288
WD40-rpts              

18 WD40-repeats found in QUERY=ENSP00000390424 (Len=1288):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  4   144-179      4.78  311.93  0.00389       12.5%     33.79
  WD 2:  Seg  7   190-228      5.79  353.91  0.00106       12.5%     47.18
  WD 3:  Seg 11   229-265      3.07  241.57  0.03403       12.5%     19.68
  WD 4:  Seg 17   313-352      5.21  329.68  0.00224       22.5%     54.85
  WD 5:  Seg 21   355-398      8.22  454.23  4.7e-05       22.5%     44.46
  WD 6:  Seg 25   403-442      7.52  425.17  0.00012       32.5%     56.14
  WD 7:  Seg 29   446-490      5.92  359.24  0.00090       20.0%     52.25
  WD 8:  Seg 33   491-533      8.33  458.81  4.1e-05       32.5%     55.58
  WD 9:  Seg 37   540-578      7.57  427.32  0.00011       22.5%     50.16
  WD10:  Seg 41   582-620      6.99  403.20  0.00023       17.5%     56.91
  WD11:  Seg 45   621-664      5.95  360.52  0.00086       22.5%     48.88
  WD12:  Seg 49   665-703      3.96  278.09  0.01108       12.5%     -10.30
  WD13:  Seg 51   718-759      4.59  304.08  0.00496       12.5%      4.97
  WD14:  Seg 55   798-833      4.79  312.72  0.00379       17.5%     29.93
  WD15:  Seg 58   842-880      7.69  432.48  9.2e-05       25.0%     49.68
  WD16:  Seg 62   881-913      3.68  266.48  0.01585       10.0%     30.95
  WD17:  Seg 66   942-980      8.54  467.46  3.1e-05       22.5%     50.89
  WD18:  Seg 71   989-1058     5.23  330.54  0.00218       15.0%     10.73

Multiple sequence alignment of 18 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  144-179    ----------L--N----HGCEVVKVV------FLIHR-FKKIGCFLTVTKDG-ILQF-----------------------------WS
   WD 2  190-228    -L-N-----QT--Q----QLYNQPMWV------IDMVC-LHNMNLVAVASTRQ-KIDF-----------------------------FD
   WD 3  229-265    IS-D-----HK--C----VRAFTFVDL------DSCAL-VMD---YWSDYHRG-VFCY-----------------------------GD
   WD 4  313-352    -H-R-----SY--R----LKALHPNWC------EQVKF-IPQMNVVVSCSAIEKSSLV-----------------------------LT
   WD 5  355-398    PA-K-----AS--KKPRLSVLRLRKGI------LCFDY-CPDRNFLVTGGYDA-FIRL-----------------------------WN
   WD 6  403-442    -K-R-----PV--W----LMKGHQTSV------THILVDSRNNSILISVSKDK-NIRV-----------------------------WD
   WD 7  446-490    -Y-I-----CL--Q----SFCGKFFALGNCPITSAYFF-EKDNTLICSTYSIG-ILKG-----------------------------YL
   WD 8  491-533    EA-Q--GLIKA--R----KRTTHCSPL------CAVLY-SKIFKQVVSGCLRG-TVSV-----------------------------WE
   WD 9  540-578    -T-M-----EF--A----VSGGQHVEM------TAMAL-DESERCLLTGLRDG-TMKM-----------------------------WN
   WD10  582-620    -G-K-----CL--L----TFPSPEQLE------ISGII-HMNKVFYVTGWSKR-ITHF-----------------------------LF
   WD11  621-664    HK-TKPVLLCY--H----WQTYHTEDI------LSMAK-YR-NQFLGTSSYSG-DILF-----------------------------WN
   WD12  665-703    TG-T------L--K----PIFNFNASR------SPSPL-QPKRVQDVNNCLAE-SHRP-----------------------------SR
   WD13  718-759    KL-S-----SLSPE----SVANTNLRR------SLVSA-PPVMRCPRDKEPDR-PVPQ-----------------------------QK
   WD14  798-833    SS-A-----SV--E----KI----IFL------QTRPR-LPHTAALLSSCMDG-YIYA-----------------------------WS
   WD15  842-880    -G-K-----FP--V----DLDNGDVVV------GAMAT-DKNDWILITGDCKG-YIKI-----------------------------WD
   WD16  881-913    -------------------IKDYCALI------DKQPF-QSSGAKVVSEAHNK-FRLL-----------------------------IP
   WD17  942-980    -P-T-----LL--M----TWKGHLNSV------ADILY-VDNFQLVISAGQDR-DVKA-----------------------------WK
   WD18  989-1058   FGLS-----VW--K----RLQDACDGP------RENRA-SLEEDGDSTGTTQK-VLHLELQEQRDLAEALIYQRREQAALMALLHGKAD

   WD40 Template    TG-E-----CL--R----TLSGHTSGV------TSVSF-SPDGKRLVSGSEDG-TIKV-----------------------------WD