Input parameters:

  Query = ENSP00000390802 (Len=873)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSP00000390802, Len=873):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MFFYLSKKISIPNNVKLQCVSWNKEQGFIACGGEDGLLKVLKLETQTDDAKLRGLAAPSNLSMNQTLEGHSGSVQVVTWN 80  
WD40-rpts      (__________________WD 1__________________)                  (_________________WD

Query       81 EQYQKLTTSDENGLIIVWMLYKGSWIEEMINNRNKSVVRSMSWNADGQKICIVYEDGAVIVGSVDGNRIWGKDLKGIQLS 160 
WD40-rpts       2________________)(___________________WD 3___________________)  (______________

Query      161 HVTWSADSKVLLFGMANGEIHIYDNQGNFMIKMKLSCLVNVTGAISIAGIHWYHGTEGYVEPDCPCLAVCFDNGRCQIMR 240 
WD40-rpts      ___WD 4________________)             (___________________WD 5__________________)

Query      241 HENDQNPVLIDTGMYVVGIQWNHMGSVLAVAGFQKAAMQDKDVNIVQFYTPFGEHLGTLKVPGKEISALSWEGGGLKIAL 320 
WD40-rpts        (_________________WD 6________________)           (________________WD 7_______

Query      321 AVDSFIYFANIRPNYKWGYCSNTVVYAYTRPDRPEYCVVFWDTKNNEKYVKYVKGLISITTCGDFCILATKADENHPQEE 400 
WD40-rpts      _________)                                (_________________WD 8________________

Query      401 NEMETFGATFVLVLCNSIGTPLDPKYIDIVPLFVAMTKTHVIAASKEAFYTWQYRVAKKLTALEINQITRSRKEGRERIY 480 
WD40-rpts      )              (________________WD 9________________)  (_______________WD10_____

Query      481 HVDDTPSGSMDGVLDYSKTIQGTRDPICAITASDKILIVGRESGTIQRYSLPNVGLIQKYSLNCRAYQLSLNCNSSRLAI 560 
WD40-rpts      _________)(_________________WD11_________________)  (_________________WD12______

Query      561 IDISGVLTFFDLDARVTDSTGQQVVGELLKLERRDVWDMKWAKDNPDLFAMMEKTRMYVFRNLDPEEPIQTSGYICNFED 640 
WD40-rpts      __________)                (______________WD13______________)                   

Query      641 LEIKSVLLDEILKDPEHPNKDYLINFEIRSLRDSRALIEKVGIKDASQFIEDNPHPRLWRLLAEAALQKLDLYTAEQAFV 720 
WD40-rpts                                                                                      

Query      721 RCKDYQGIKFVKRLGKLLSESMKQAEVVGYFGRFEEAERTYLEMDRRDLAIGLRLKLGDWFRVLQLLKTGSGDADDSLLE 800 
WD40-rpts                                                                                      

Query      801 QANNAIGDYFADRQKWLNAVQYYVQGRNQERLAECYYMLEDYEGLENLAISLPENHKLLPVGNSTNVCQSWNV 873 
WD40-rpts                                                                               

13 WD40-repeats found in QUERY=ENSP00000390802 (Len=873):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     1-42       6.39  378.55  0.00049       22.5%     56.24
  WD 2:  Seg  5    61-99       7.95  443.23  6.6e-05       30.0%     46.65
  WD 3:  Seg  8   100-143      5.96  360.99  0.00085       25.0%     53.32
  WD 4:  Seg 12   146-184      6.95  401.68  0.00024       25.0%     56.18
  WD 5:  Seg 17   198-240      4.94  318.53  0.00317       17.5%     37.80
  WD 6:  Seg 21   243-281      4.04  281.48  0.00998       10.0%     38.50
  WD 7:  Seg 25   293-330      5.95  360.49  0.00086       22.5%     56.39
  WD 8:  Seg 32   363-401      4.58  303.97  0.00498       12.5%     31.87
  WD 9:  Seg 36   416-453      2.80  230.37  0.04784        7.5%     29.81
  WD10:  Seg 39   456-490      3.24  248.35  0.02767       15.0%     24.46
  WD11:  Seg 42   491-530      3.87  274.48  0.01238       25.0%     49.31
  WD12:  Seg 46   533-571      4.92  317.92  0.00323       15.0%     53.22
  WD13:  Seg 50   588-621      3.02  239.29  0.03648       15.0%     38.50

Multiple sequence alignment of 13 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    1-42     MF--FYL--SKKISI---PNNVKLQCVSWNKEQGFIACGGEDGLLKVLK
   WD 2   61-99     -L--SMN----QTLE---GHSGSVQVVTWNEQYQKLTTSDENGLIIVWM
   WD 3  100-143    LY--KGSWIEEMINN---RNKSVVRSMSWNADGQKICIVYEDGAVIVGS
   WD 4  146-184    -G--NRI----WGKD---LKGIQLSHVTWSADSKVLLFGMANGEIHIYD
   WD 5  198-240    LV--NVT----GAISIAGIHWYHGTEGYVEPDCPCLAVCFDNGRCQIMR
   WD 6  243-281    -N--DQN----PVLI---DTGMYVVGIQWNHMGSVLAVAGFQKAAMQDK
   WD 7  293-330    -G--EHL----GTLK---VPGKEISALSWEGGGLKIALAV-DSFIYFAN
   WD 8  363-401    T---KNN----EKYV---KYVKGLISITTCGDFCILATKADENHPQEEN
   WD 9  416-453    N---SIG----TPLD---PKYIDIVPLFVAMTKTHVIAAS-KEAFYTWQ
   WD10  456-490    VA--KKL----TALE---IN-----QITRSRKEGRERIYHVDDTPSGSM
   WD11  491-530    DGVLDYS----KTIQ---GTRDPICAITASDKI--LIVGRESGTIQRYS
   WD12  533-571    -N--VGL----IQKY---SLNCRAYQLSLNCNSSRLAIIDISGVLTFFD
   WD13  588-621    ------------LLK---LERRDVWDMKWAKDNPDLFAMMEKTRMYVFR

   WD40 Template    TG--ECL----RTLS---GHTSGVTSVSFSPDGKRLVSGSEDGTIKVWD