Input parameters:

  Query = ENSP00000392846 (Len=511)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSP00000392846, Len=511):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MEKMSRVTTALGGSVLTGRTMHCHLDAPANAISVCRDAAQVVVAGRSIFKIYAIEEEQFVEKLNLRVGRKPSLNLSCADV 80  
WD40-rpts                    (_________________WD 1________________)   (_____________________WD

Query       81 VWHQMDENLLATAATNGVVVTWNLGRPSRNKQDQLFTEHKRTVNKVCFHPTEAHVLLSGSQDGFMKCFDLRRKDSVSTFS 160 
WD40-rpts       2____________________)      (_________________WD 3_________________)   (_______

Query      161 GQSESVRDVQFSIRDYFTFASTFENGNVQLWDIRRPDRCERMFTAHNGPVFCCDWHPEDRGWLATGGRDKMVKVWDMTTH 240 
WD40-rpts      __________WD 4_________________)    (_________________WD 5_________________)(___

Query      241 RAKEMHCVQTIASVARVKWRPECRHHLATCSMMVDHNIYVWDVRRPFVPAAMFEEHRDVTTGIAWRHPHDPSFLLSGSKD 320 
WD40-rpts      _________________WD 6____________________)        (________________WD 7_________

Query      321 SSLCQHLFRDASQPVERANPEGLCYGLFGDLAFAAKESLVAAESGRKPYTGDRRHPIFFKRKLDPAEPFAGLASSALSVF 400 
WD40-rpts      ______)       (_________________WD 8________________)        (_________________W

Query      401 ETEPGGGGMRWFVDTAERYALAGRPLAELCDHNAKVARELGRNQVAQTWTMLQPRRPPAAHHEVAGRQLPLSRRLRPPLR 480 
WD40-rpts      D 9________________)  (_______________________WD10______________________)       

Query      481 VLLTGHLLGLPGRPRAEPRLVLCPRRAEAGT 511 
WD40-rpts                                     

10 WD40-repeats found in QUERY=ENSP00000392846 (Len=511):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  2    15-53       5.09  324.86  0.00260       17.5%     50.04
  WD 2:  Seg  6    57-103      6.71  392.04  0.00032       17.5%     40.95
  WD 3:  Seg  9   110-149      7.63  430.03  1.0e-04       32.5%     48.62
  WD 4:  Seg 13   153-192      8.31  457.88  4.2e-05       32.5%     53.42
  WD 5:  Seg 17   197-236      7.97  443.70  6.5e-05       30.0%     51.08
  WD 6:  Seg 21   237-282      6.09  366.11  0.00072       22.5%     48.52
  WD 7:  Seg 25   291-327      6.31  375.47  0.00054       20.0%     48.90
  WD 8:  Seg 27   335-373      4.14  285.77  0.00874        7.5%     22.28
  WD 9:  Seg 31   382-420      5.28  332.66  0.00205        5.0%      8.12
  WD10:  Seg 33   423-473      4.70  308.78  0.00429       12.5%     14.31

Multiple sequence alignment of 10 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   15-53     -V---LTGRTMHCHLDAPANAISV--C--------R-DAA-QV------------VVAG-RSIFKIYA
   WD 2   57-103    -E---QFVEKLNLRVGR-KPSLNL--SCADVVWHQM-DEN-LL------------ATAATNGVVVTWN
   WD 3  110-149    -N---KQDQLFTEHKRT-VNKVCF--H--------PTEAH-VL------------LSGSQDGFMKCFD
   WD 4  153-192    -K---DSVSTFSGQSES-VRDVQF--S--------IRDYF-TF------------ASTFENGNVQLWD
   WD 5  197-236    -D---RCERMFTAHNGP-VFCCDW--H--------P-EDRGWL------------ATGGRDKMVKVWD
   WD 6  237-282    MTTHRAKEMHCVQTIAS-VARVKW--R--------P-ECR-HH---------LATCSMMVDHNIYVWD
   WD 7  291-327    --------AMFEEHRDV-TTGIAWRHP--------H-DPS-FL------------LSGSKDSSLCQHL
   WD 8  335-373    -V---ERANPEGLCYGL-FGDLAF--A--------A-KES-LV------------AAESGRKPYTGDR
   WD 9  382-420    KL---DPAEPF-AGLAS-SALSVF--E--------T-EPG-GG------------GMRWFVDTAERYA
   WD10  423-473    -G---RPLAELCDHNAK-VARELG--R--------N-QVA-QTWTMLQPRRPPAAHHEVAGRQLPLSR

   WD40 Template    TG---ECLRTLSGHTSG-VTSVSF--S--------P-DGK-RL------------VSGSEDGTIKVWD