Input parameters:

  Query = ENSP00000394097 (Len=526)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSP00000394097, Len=526):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MSITSDEVNFLVYRYLQESGFSHSAFTFGIESHISQSNINGTLVPPAALISILQKGLQYVEAEISINEDGTVFDGRPIES 80  
WD40-rpts                                (______________________________________________WD 1___

Query       81 LSLIDAVMPDVVQTRQQAFREKLAQQQASAAAAAAAATAAATAATTTSAGVSHQNPSKNREATVNGEENRAHSVNNHAKP 160 
WD40-rpts      ___________________________________________)________________WD 2________________

Query      161 MEIDGEVEIPSSKATVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDVPSNKDV 240 
WD40-rpts      _)        (_________________WD 3________________)                  (____________

Query      241 TSLDWNTNGTLLATGSYDGFARIWTEDGNLASTLGQHKGPIFALKWNRKGNYILSAGVDKTTIIWDAHTGEAKQQFPFHS 320 
WD40-rpts      ____WD 4________________)  (_________________WD 5________________)   (__________

Query      321 APALDVDWQNNTTFASCSTDMCIHVCRLGCDRPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQEVCIHDLQ 400 
WD40-rpts      ______WD 6________________)   (_________________WD 7________________)   (_______

Query      401 AHNKEIYTIKWSPTGPATSNPNSNIMLASASFDSTVRLWDIERGVCTHTLTKHQEPVYSVAFSPDGKYLASGSFDKCVHI 480 
WD40-rpts      ______________WD 8_____________________)   (_________________WD 9_______________

Query      481 WNTQSGNLVHSYRGTGGIFEVCWNARGDKVGASASDGSVCVLDLRK 526 
WD40-rpts      _)   (________________WD10________________)   

10 WD40-repeats found in QUERY=ENSP00000394097 (Len=526):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  2    27-124      4.04  281.42  0.01000       20.0%      6.23
  WD 2:  Seg  4   123-162      8.51  466.09  3.3e-05       10.0%     32.90
  WD 3:  Seg  7   171-209      9.57  510.02  8.3e-06       32.5%     43.74
  WD 4:  Seg 11   228-265      7.62  429.23  0.00010       25.0%     38.21
  WD 5:  Seg 14   268-306      9.46  505.40  9.6e-06       25.0%     53.60
  WD 6:  Seg 18   310-347      6.88  398.74  0.00026       22.5%     52.79
  WD 7:  Seg 22   351-389     10.12  532.89  4.1e-06       35.0%     55.56
  WD 8:  Seg 26   393-440      8.29  457.07  4.3e-05       32.5%     53.08
  WD 9:  Seg 30   444-482     10.73  558.03  1.9e-06       50.0%     55.95
  WD10:  Seg 34   486-523      7.65  430.74  9.7e-05       22.5%     56.16

Multiple sequence alignment of 10 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   27-124    TFGIESHISQSNINGTLVPPAALISILQKGLQYVEAEISINEDGTVFDGR---------PIESLSLIDAVMPDVVQTRQQAFREKLAQQQASAAAAAAAATAAATAA
   WD 2  123-162    AATTTSAGVSHQNPSKNRE-------------------------ATVNGE---------ENRAHSVNNHAKP---------------------------------ME
   WD 3  171-209    -SSKATVLRGHESEVFICA-------------------------WNPVSD---------LLASGSGDSTARI---------------------------------WN
   WD 4  228-265    REG--GHDVPSNKDVTSLD-------------------------WNTNGT---------LLATGSYDGFARI---------------------------------WT
   WD 5  268-306    -GNLASTLGQHKGPIFALK-------------------------WNRKGN---------YILSAGVDKTTII---------------------------------WD
   WD 6  310-347    -GEAKQQFPFHSAPALDVD-------------------------WQ-NNT---------TFASCSTDMCIHV---------------------------------CR
   WD 7  351-389    -DRPVKTFQGHTNEVNAIK-------------------------WDPSGM---------LLASCSDDMTLKI---------------------------------WS
   WD 8  393-440    -EVCIHDLQAHNKEIYTIK-------------------------WSPTGPATSNPNSNIMLASASFDSTVRL---------------------------------WD
   WD 9  444-482    -GVCTHTLTKHQEPVYSVA-------------------------FSPDGK---------YLASGSFDKCVHI---------------------------------WN
   WD10  486-523    -GNLVHSYRGT-GGIFEVC-------------------------WNARGD---------KVGASASDGSVCV---------------------------------LD

   WD40 Template    TGECLRTLSGHTSGVTSVS-------------------------FSPDGK---------RLVSGSEDGTIKV---------------------------------WD