Input parameters:

  Query = ENSP00000402879 (Len=506)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSP00000402879, Len=506):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MHLKHLRTLLSPQDGAAKVTCMAWSQNNAKFAVCTVDRVVLLYDEHGERRDKFSTKPADMKYGRKSYMVKGMAFSPDSTK 80  
WD40-rpts          (_________________WD 1_________________)           (_________________WD 2___

Query       81 IAIGQTDNIIYVYKIGEDWGDKKVICNKFIQTSAVTCLQWPAEYIIVFGLAEGKVRLANTKTNKSSTIYGTESYVVSLTT 160 
WD40-rpts      _____________)(____________________WD 3___________________)  (_________________W

Query      161 NCSGKGILSGHADGTIVRYFFDDEGSGESQGKLVNHPCPPYALAWATNSIVAAGCDRKIVAYGKEGHMLQTFDYSRDPQE 240 
WD40-rpts      D 4________________)      (________________WD 5_______________)        (________

Query      241 REFTTAVSSPGGQSVVLGSYDRLRVFNWIPRRSIWEEAKPKEITNLYTITALAWKRDGSRLCVGTLCGGVEQFDCCLRRS 320 
WD40-rpts      _______WD 6_______________)        (_________________WD 7________________)   (__

Query      321 IYKNKFELTYVEEVKILGKERYLVAHTSETLLLGDLNTNRLSEIAWQGSGGNEKYFFENENVCMIFNAGELTLVEYGNND 400 
WD40-rpts      ______________WD 8________________)            (_________________WD 9___________

Query      401 TLGSVRTEFMNPHLISVRINERCQRGTEDNKKLAYLIDIKTIAIVDLIGGYNIGTVSHESRVDWLELNETGHKLLFRDRK 480 
WD40-rpts      _____)(_________________WD10_________________)  (________________WD11___________

Query      481 LRVRRATKALGIGWPTEGVRQAATRD 506 
WD40-rpts      ____)                     

11 WD40-repeats found in QUERY=ENSP00000402879 (Len=506):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     5-44       8.31  457.90  4.2e-05       15.0%     48.78
  WD 2:  Seg  6    56-94       8.70  474.17  2.5e-05       22.5%     47.26
  WD 3:  Seg  9    95-139      6.94  401.15  0.00024       15.0%     51.97
  WD 4:  Seg 13   142-180      8.66  472.32  2.7e-05       32.5%     52.90
  WD 5:  Seg 17   187-223      6.44  380.71  0.00046       17.5%     50.90
  WD 6:  Seg 22   232-267      6.36  377.31  0.00051       22.5%     44.95
  WD 7:  Seg 25   276-314      7.68  431.88  9.4e-05       22.5%     48.93
  WD 8:  Seg 29   318-355      6.38  378.23  0.00050       15.0%     49.86
  WD 9:  Seg 34   368-406      6.76  393.70  0.00031       12.5%     41.85
  WD10:  Seg 38   407-446      9.19  494.21  1.4e-05       20.0%     48.45
  WD11:  Seg 42   449-485      5.20  329.56  0.00225       20.0%     50.38

Multiple sequence alignment of 11 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    5-44     HLR-----TLLSPQDGAAKVTCMAWSQNNAKFAVCTVDRVVLLYD
   WD 2   56-94     -KP-----ADMKYGRKSYMVKGMAFSPDSTKIAIGQTDNIIYVYK
   WD 3   95-139    IGEDWGDKKVICNKFIQTSAVTCLQWPAEYIIVFGLAEGKVRLAN
   WD 4  142-180    -TN-----KSSTIYGTESYVVSLTTNCSGKGILSGHADGTIVRYF
   WD 5  187-223    -GE-----SQGKLVNHPCPPYALAWATNS--IVAAGCDRKIVAYG
   WD 6  232-267    --------FDYSRDPQEREFTTAVSSPGGQSVVLGSYD-RLRVFN
   WD 7  276-314    -EE-----AKPKEITNLYTITALAWKRDGSRLCVGTLCGGVEQFD
   WD 8  318-355    -RR-----SIYKNKFELTYVEEVKILGKERYLVAHTSE-TLLLGD
   WD 9  368-406    -GS-----GGNEKYFFENENVCMIFNAGELTLVEYGNNDTLGSVR
   WD10  407-446    TEF-----MNPHLISVRINERCQRGTEDNKKLAYLIDIKTIAIVD
   WD11  449-485    -GG-----YNIGTVSHESRVDWLELNETGHKLLFR--DRKLRVRR

   WD40 Template    TGE-----CLRTLSGHTSGVTSVSFSPDGKRLVSGSEDGTIKVWD