Input parameters:

  Query = ENSP00000406268 (Len=572)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSP00000406268, Len=572):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MPYEIKKVFASLPQVERGVSKIIGGDPKGNNFLYTNGKCVILRNIDNPALADIYTEHAHQVVVAKYAPSGFYNIAWTEDS 80  
WD40-rpts      (___________________WD 1___________________)          (____________________WD 2_

Query       81 KRIAVVGEGREKFGAVFLWDSGSSVGEITGHNKVINSVDIKQSRPYRLATGSDDNCAAFFEGPPFKFKFTIGDHSRFVNC 160 
WD40-rpts      ___________________)(__________________WD 3_________________)   (_______________

Query      161 VRFSPDGNRFATASADGQIYIYDGKTGEKVCALGGSKAHDGGIYAISWSPDSTHLLSASGDKTSKIWDVSVNSVVSTFPM 240 
WD40-rpts      __WD 4________________)   (__________________WD 5__________________)(___________

Query      241 GSTVLDQQLGCLWQKDHLLSVSLSGYINYLDRNNPSKPLHVIKGHSKSIQCLTVHKNGGKSYIYSGSHDGHINYWDSETG 320 
WD40-rpts      ________WD 6__________________)    (__________________WD 7_________________)(___

Query      321 ENDSFAGKGHTNQVSRMTVDESGQLISCSMDDTVRYTSLMLRDYSGQGVVKLDVQPKCVAVGPGGYAVVVCIGQIVLLKD 400 
WD40-rpts      _______________WD 8__________________)    (________________WD 9________________)

Query      401 QRKCFSIDNPGYEPEVVAVHPGGDTVAIGGVDGNVRLYSILGTTLKDEGKLLEAKGPVTDVAYSHDGAFLAVCDASKVVT 480 
WD40-rpts      (_________________WD10________________)     (_________________WD11______________

Query      481 VFSVADGYSENNVFYGHHAKIVCLAWSPDNEHFASGGMDMMVYVWTLSDPETRVKIQDAHRLHHVSSLAWLDEHTLVTTS 560 
WD40-rpts      __)(___________________WD12__________________)(___________________WD13__________

Query      561 HDASVKEWTITY 572 
WD40-rpts      ________)   

13 WD40-repeats found in QUERY=ENSP00000406268 (Len=572):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     1-44       4.13  285.43  0.00883        5.0%     48.43
  WD 2:  Seg  6    55-100      6.72  392.40  0.00032       25.0%     53.59
  WD 3:  Seg 10   101-141      9.29  498.46  1.2e-05       25.0%     55.09
  WD 4:  Seg 14   145-183      9.42  503.73  1.0e-05       37.5%     58.70
  WD 5:  Seg 18   187-228      8.79  477.92  2.3e-05       45.0%     58.31
  WD 6:  Seg 22   229-271      6.45  381.01  0.00046       20.0%     52.62
  WD 7:  Seg 26   276-316      7.94  442.73  6.7e-05       30.0%     54.77
  WD 8:  Seg 30   317-358      6.50  383.09  0.00043       25.0%     51.55
  WD 9:  Seg 34   363-400      4.78  312.14  0.00386       12.5%     38.29
  WD10:  Seg 38   401-439      7.81  437.27  8.0e-05       15.0%     56.09
  WD11:  Seg 42   445-483      7.72  433.65  8.9e-05       22.5%     56.63
  WD12:  Seg 46   484-526      8.54  467.24  3.1e-05       25.0%     55.48
  WD13:  Seg 50   527-569      7.51  424.98  0.00012       22.5%     52.83

Multiple sequence alignment of 13 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    1-44     MP---Y---EIKKVFASLPQV---ERGVSKIIGGDPKG--N-NFLYTN-G----KCVILRN
   WD 2   55-100    TE-HAH---QVVVA-----KY---APSGFYNIAWTEDS--K-RIAVVGEGREKFGAVFLWD
   WD 3  101-141    SG---S---SVGEI-----TG---HNKVINSVDIKQSR--PYRLATGSDD----NCAAFFE
   WD 4  145-183    -F---K---FKFTI-----GD---HSRFVNCVRFSPDG--N-RFATASAD----GQIYIYD
   WD 5  187-228    -G---E---KVCAL-----GGSKAHDGGIYAISWSPDS--T-HLLSASGD----KTSKIWD
   WD 6  229-271    VS---VNSVVSTFP-----MG---STVLDQQLGCLWQK--D-HLLSVSLS----GYINYLD
   WD 7  276-316    -S---K---PLHVI-----KG---HSKSIQCLTVHKNGGKS-YIYSGSHD----GHINYWD
   WD 8  317-358    SETGEN---DSFAG-----KG---HTNQVSRMTVDESG--Q--LISCSMD----DTVRYTS
   WD 9  363-400    -D---Y---SGQGV-----VK---LDVQPKCVAVGPGG--Y-AVVVCI-G----QIVLLKD
   WD10  401-439    -Q---R---KCFSI-----DN---PGYEPEVVAVHPGG--D-TVAIGGVD----GNVRLYS
   WD11  445-483    -L---K---DEGKL-----LE---AKGPVTDVAYSHDG--A-FLAVCDAS----KVVTVFS
   WD12  484-526    VA---DGYSENNVF-----YG---HHAKIVCLAWSPDN--E-HFASGGMD----MMVYVWT
   WD13  527-569    LS---DPETRVKIQ-----DA---HRLHHVSSLAWLDE--H-TLVTTSHD----ASVKEWT

   WD40 Template    TG---E---CLRTL-----SG---HTSGVTSVSFSPDG--K-RLVSGSED----GTIKVWD