Input parameters:

  Query = ENSP00000410937 (Len=1224)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSP00000410937, Len=1224):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MLPYTVNFKVSARTLTGALNAHNKAAVDWGWQGLIAYGCHSLVVVIDSITAQTLQVLEKHKADVVKVKWARENYHHNIGS 80  
WD40-rpts                                                        (______________________WD 1___

Query       81 PYCLRLASADVNGKIIVWDVAAGVAQCEIQEHAKPIQDVQWLWNQDASRDLLLAIHPPNYIVLWNADTGTKLWKKSYADN 160 
WD40-rpts      __________________)   (___________________WD 2__________________)(______________

Query      161 ILSFSFDPFDPSHLTLLTSEGIVFISDFSPSKPPSGPGKKVYISSPHSSPAHNKLATATGAKKALNKVKILITQEKPSAE 240 
WD40-rpts      ____WD 3__________________)(___________________WD 4__________________)   (______

Query      241 FITLNDCLQLAYLPSKRNHMLLLYPREILILDLEVNQTVGVIAIERTGVPFLQVIPCFQRDGLFCLHENGCITLRVRRSY 320 
WD40-rpts      ___________WD 5________________)   (__________________WD 6_________________)    

Query      321 NNIFTTSNEEPDPDPVQELTYDLRSQCDAIRVTKTVRPFSMVCCPVNENAAALVVSDGRVMIWELKSAVCNRNSRNSSSG 400 
WD40-rpts                                      (_____________WD 7_____________)   (____________

Query      401 VSPLYSPVSFCGIPVGVLQNKLPDLSLDNMIGQSAIAGEEHPRGSILREVHLKFLLTGLLSGLPAPQFAIRMCPPLTTKN 480 
WD40-rpts      _____WD 8________________)                                  (__________________W

Query      481 IKMYQPLLAVGTSNGSVLVYHLTSGLLHKELSIHSCEVKGIEWTSLTSFLSFATSTPNNMGLVRNELQLVDLPTGRSIAF 560 
WD40-rpts      D 9_________________)   (_____________________WD10____________________)         

Query      561 RGERGNDESAIEMIKVSHLKQYLAVVFRDKPLELWDVRTCTLLREMSKNFPTITALEWSPSHNLKSLRKKQLATREAMAR 640 
WD40-rpts      (_______________WD11_______________)   (_____________WD12_____________)   (_____

Query      641 QTVVSDTELSIVESSVISLLQEAESKSELSQNISAREHFVFTDIDGQVYHLTVEGNSVKDSARIPPDGSMGSITCIAWKG 720 
WD40-rpts      _______________WD13___________________)              (___________________WD14___

Query      721 DTLVLGDMDGNLNFWDLKGRVSRGIPTHRSWVRKIRFAPGKGNQKLIAMYNDGAEVWDTKEVQMVSSLRSGRNVTFRILD 800 
WD40-rpts      _______________)  (_________________WD15_________________)   (__________________

Query      801 VDWCTSDKVILASDDGCIRVLEMSMKSACFRMDEQELTEPVWCPYLLVPRASLALKAFLLHQPWNGQYSLDISHVDYPEN 880 
WD40-rpts      WD16_________________)                                                          

Query      881 EEIKNLLQEQLNSLSNDIKKLLLDPEFTLLQRCLLVSRLYGDESELHFWTVAAHYLHSLSQEKSASTTAPKEAAPRDKLS 960 
WD40-rpts                                             (________________________WD17____________

Query      961 NPLDICYDVLCENAYFQKFQLERVNLQEVKRSTYDHTRKCTDQLLLLGQTDRAVQLLLETSADNQHYYCDSLKACLVTTV 1040
WD40-rpts      ___________)                                                                    

Query     1041 TSSGPSQSTIKLVATNMIANGKLAEGVQLLCLIDKAADACRYLQTYGEWNRAAWLAKVRLNPEECADVLRRWVDHLCSPQ 1120
WD40-rpts                                                                                      

Query     1121 VNQKSKALLVLLSLGCFFSVAETLHSMRYFDRAALFVEACLKYGAFEVTEDTDKLITAIYADYARSLKNLGFKQGAVLFA 1200
WD40-rpts                                                                                      

Query     1201 SKAGAAGKDLLNELESPKEEPIEE 1224
WD40-rpts                              

17 WD40-repeats found in QUERY=ENSP00000410937 (Len=1224):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  5    51-99       6.84  397.09  0.00028       32.5%     49.91
  WD 2:  Seg  9   103-145      5.69  349.64  0.00121       15.0%     55.32
  WD 3:  Seg 13   146-187      5.38  336.93  0.00179       20.0%     51.74
  WD 4:  Seg 17   188-230      4.64  306.35  0.00462       20.0%     31.35
  WD 5:  Seg 20   234-272      6.62  388.10  0.00037       10.0%     47.90
  WD 6:  Seg 24   276-316      3.94  277.52  0.01128       20.0%     45.39
  WD 7:  Seg 29   353-384      5.40  337.86  0.00174       12.5%     45.06
  WD 8:  Seg 31   388-426      4.59  304.47  0.00490       15.0%      2.10
  WD 9:  Seg 33   461-501      4.17  286.71  0.00849       15.0%     26.53
  WD10:  Seg 36   505-551      5.85  356.37  0.00098       17.5%     56.74
  WD11:  Seg 41   561-596      7.00  404.02  0.00022       20.0%     48.69
  WD12:  Seg 43   600-631      2.84  232.07  0.04545       15.0%     43.91
  WD13:  Seg 47   635-679      4.35  294.34  0.00670       10.0%     36.91
  WD14:  Seg 52   694-736      6.95  401.63  0.00024       25.0%     47.59
  WD15:  Seg 56   739-778      7.30  416.31  0.00015       27.5%     53.79
  WD16:  Seg 60   782-822      5.00  321.39  0.00290       20.0%     41.78
  WD17:  Seg 68   920-972      3.46  257.63  0.02081        7.5%      3.76

Multiple sequence alignment of 17 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   51-99     -AQ---------TL-Q----V---LEKHKA---D-VVKVKWA------R----ENYHHNIGSPYCLR--LA--SADVNGK--------IIVWD
   WD 2  103-145    -GV---------AQ-C----E---IQEHAK---P-IQDVQWL------WNQDASR----------DL--LL--AIHPPNY--------IVLWN
   WD 3  146-187    ADT---------GT-K----L--WKKSYAD---N-ILSFSFD------P---FDP----------SH--LT--LLTSEGI--------VFISD
   WD 4  188-230    FSP---------SKPP----S---GPGKKV---Y-ISSPHSS------P----AH----------NK--LATATGAKKAL--------NKVKI
   WD 5  234-272    -QE---------KP-S----A---EFITLN---D-CLQLAYL------P----SK----------RN--HM--LLLYPRE--------ILILD
   WD 6  276-316    -NQ---------TV-G----V---IAIERT---G-VPFLQVI------P----CF----------QRDGLF--CLHENGC--------ITLRV
   WD 7  353-384    TK-------------------------TVR---P-FSMVCCP------V----NE----------NA--AA--LVVSDGR--------VMIWE
   WD 8  388-426    -AV---------CN-R----N---SRNSSS---G-VSPLYSP------V----SF----------CG--IP--VGVLQNK--------LPDLS
   WD 9  461-501    SGL---------PA-P----Q---FAIRMC---PPLTTKNIK------M----YQ----------PL--LA--VGTSNGS--------VLVYH
   WD10  505-551    -GL---------LH-K----E---LSIHSC---E-VKGIEWT------S----LT----------SF--LS--FATSTPNNMGLVRNELQLVD
   WD11  561-596    RGE---------------------RGNDES---A-IEMIKVS------H----LK----------QY--LA--VVFRDKP--------LELWD
   WD12  600-631    -CT---------LL-R----E---MSKNFP---T-ITALEWS------P----SH----------N-----------LKS--------LRKKQ
   WD13  635-679    -RE---------AM-A----R---QTVVSD---T-ELSIVESSVISLLQ----EA----------ES--KS--ELSQNIS--------AREHF
   WD14  694-736    EGN---------SV-K----DSARIPPDGS---M-GSITCIA------W----KG----------DT--LV--LGDMDGN--------LNFWD
   WD15  739-778    -GR---------VS-R----G---IPTHRS---W-VRKIRFA------P---GKG----------NQ--KL--IAMYNDG--------AEVWD
   WD16  782-822    -VQ---------MV-S----S---LRSGRNVTFR-ILDVDWC------T----SD----------K---VI--LASDDGC--------IRVLE
   WD17  920-972    YGDESELHFWTVAA-HYLHSL---SQEKSA---S-TTAPKEA------A----PR----------DK--LS--NPLDICY--------DVLCE

   WD40 Template    TGE---------CL-R----T---LSGHTS---G-VTSVSFS------P----DG----------KR--LV--SGSEDGT--------IKVWD