Input parameters:

  Query = ENSP00000410946 (Len=1242)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSP00000410946, Len=1242):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MRAVLTWRDKAEHCINDIAFKPDGTQLILAAGSRLLVYDTSDGTLLQPLKGHKDTVYCVAYAKDGKRFASGSADKSVIIW 80  
WD40-rpts        (________________WD 1_______________)   (_________________WD 2________________

Query       81 TSKLEGILKYTHNDAIQCVSYNPITHQLASCSSSDFGLWSPEQKSVSKHKSSSKIICCSWTNDGQYLALGMFNGIISIRN 160 
WD40-rpts      )     (______________WD 3______________)(_________________WD 4_________________)

Query      161 KNGEEKVKIERPGGSLSPIWSICWNPSSRWESFWMNRENEDAEDVIVNRYIQEIPSTLKSAVYSSQGSEAEEEEPEEEDD 240 
WD40-rpts      (___________________WD 5___________________)                   (________________

Query      241 SPRDDNLEERNDILAVADWGQKVSFYQLSGKQIGKDRALNFDPCCISYFTKGEYILLGGSDKQVSLFTKDGVRLGTVGEQ 320 
WD40-rpts      ___WD 6___________________)  (_________________WD 7________________)  (_________

Query      321 NSWVWTCQAKPDSNYVVVGCQDGTISFYQLIFSTVHGLYKDRYAYRDSMTDVIVQHLITEQKVRIKCKELVKKIAIYRNR 400 
WD40-rpts      ________WD 8________________)                                                   

Query      401 LAIQLPEKILIYELYSEDLSDMHYRVKEKIIKKFECNLLVVCANHIILCQEKRLQCLSFSGVKEREWQMESLIRYIKVIG 480 
WD40-rpts                                                                (___________________WD

Query      481 GPPGREGLLVGLKNGQILKIFVDNLFAIVLLKQATAVRCLDMSASRKKLAVVDENDTCLVYDIDTKELLFQEPNANSVAW 560 
WD40-rpts       9__________________) (_________________WD10_________________)(________________W

Query      561 NTQCEDMLCFSGGGYLNIKASTFPVHRQKLQGFVVGYNGSKIFCLHVFSISAVEVPQSAPMYQYLDRKLFKEAYQIACLG 640 
WD40-rpts      D11________________)                                                            

Query      641 VTDTDWRELAMEALEGLDFETAKKAFIRVQDLRYLELISSIEERKKRGETNNDLFLADVFSYQGKFHEAAKLYKRSGHEN 720 
WD40-rpts                                                                                      

Query      721 LALEMYTDLCMFEYAKDFLGSGDPKETKMLITKQADWARNIKEPKAAVEMYISAGEHVKAIEICGDHGWVDMLIDIARKL 800 
WD40-rpts                                                                                      

Query      801 DKAEREPLLLCATYLKKLDSPGYAAETYLKMGDLKSLVQLHVETQRWDEAFALGEKHPEFKDDIYMPYAQWLAENDRFEE 880 
WD40-rpts                                                                                      

Query      881 AQKAFHKAGRQREAVQVLEQLTNNAVAESRFNDAAYYYWMLSMQCLDIAQDPAQKDTMLGKFYHFQRLAELYHGYHAIHR 960 
WD40-rpts                                                                                      

Query      961 HTEDPFSVHRPETLFNISRFLLHSLPKDTPSGISKVWKILFTLAKQSKALGAYRLARHAYDKLRGLYIPARFQKSIELGT 1040
WD40-rpts                                                                                      

Query     1041 LTIRAKPFHDSEELVPLCYRCSTNNPLLNNLGNVCINCRQPFIFSASSYDVLHLVEFYLEEGITDEEAISLIDLEVLRPK 1120
WD40-rpts                                                                                      

Query     1121 RDDRQLEIANNSSQILRLVETKDSIGDEDPFTAKLSFEQGGSEFVPVVVSRLVLRSMSRRDVLIKRWPPPLRWQYFRSLL 1200
WD40-rpts                                                                                      

Query     1201 PDASITMCPSCFQMFHSEDYELLVLQHGCCPYCRRCKDDPGP 1242
WD40-rpts                                                

11 WD40-repeats found in QUERY=ENSP00000410946 (Len=1242):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     3-39       4.38  295.42  0.00648       20.0%     47.06
  WD 2:  Seg  4    43-81       9.23  495.94  1.3e-05       40.0%     55.64
  WD 3:  Seg  8    87-120      3.84  273.19  0.01289       20.0%     46.40
  WD 4:  Seg 11   121-160      6.80  395.62  0.00029       20.0%     56.14
  WD 5:  Seg 15   161-204      4.97  319.92  0.00304       12.5%     52.23
  WD 6:  Seg 20   224-267      3.72  268.37  0.01495        2.5%     37.05
  WD 7:  Seg 23   270-308      6.18  369.74  0.00065       12.5%     54.30
  WD 8:  Seg 27   311-349      7.13  409.25  0.00019       32.5%     55.99
  WD 9:  Seg 42   459-501      3.19  246.28  0.02947       15.0%     49.56
  WD10:  Seg 46   503-542      6.22  371.73  0.00061       22.5%     55.18
  WD11:  Seg 50   543-580      2.84  231.80  0.04581       12.5%     41.82

Multiple sequence alignment of 11 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    3-39     A----------VLTWRDKAEHCINDIAFKPDGTQLILAAGS-RLLVYD
   WD 2   43-81     -G----T----LLQPLKGHKDTVYCVAYAKDGKRFASGSADKSVIIWT
   WD 3   87-120    -------------ILKYTHNDAIQCVSYNPITHQLASCS-SSDFGLWS
   WD 4  121-160    PE----Q----KSVSKHKSSSKIICCSWTNDGQYLALGMFNGIISIRN
   WD 5  161-204    KNGEEKV----KIERPGGSLSPIWSICWNPSSRWESFWMNRENEDAED
   WD 6  224-267    SS----QGSEAEEEEPEEEDDSPRDDNLEERNDILAVADWGQKVSFYQ
   WD 7  270-308    -G----K----QIGKDRALNFDPCCISYFTKGEYILLGGSDKQVSLFT
   WD 8  311-349    -G----V----RLGTVGEQNSWVWTCQAKPDSNYVVVGCQDGTISFYQ
   WD 9  459-501    FS-GVKE----REWQMESLIRYIKVIGGPPGREGLLVGLKNGQILKIF
   WD10  503-542    DN----L----FAIVLLKQATAVRCLDMSASRKKLAVVDENDTCLVYD
   WD11  543-580    ID----T------KELLFQEPNANSVAWNTQCEDMLCFSGGGYLNIKA

   WD40 Template    TG----E----CLRTLSGHTSGVTSVSFSPDGKRLVSGSEDGTIKVWD