Input parameters:

  Query = ENSP00000413572 (Len=485)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSP00000413572, Len=485):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MAAAVPDEAVARDVQRLLVQFQDEGGQLLGSPFDVPVDITPDRLQLVCNALLAQEDPLPLAFFVHDAEIVSSLGKTLESQ 80  
WD40-rpts       (_________________WD 1_________________)         (_________________WD 2________

Query       81 AVETEKVLDIIYQPQAIFRVRAVTRCTSSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCKGHRHWVL 160 
WD40-rpts      ________)              (_________________WD 3________________)   (______________

Query      161 SISWSPDGRKLASGCKNGQILLWDPSTGKQVGRTLAGHSKWITGLSWEPLHANPECRYVASSSKDGSVRIWDTTAGRCER 240 
WD40-rpts      ___WD 4________________)(_____________________WD 5_____________________)   (____

Query      241 ILTGHTQSVTCLRWGGDGLLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYALRTGAFEPAEASVNPQDLQG 320 
WD40-rpts      ____________WD 6________________)   (_________________WD 7________________)   (_

Query      321 SLQELKERALSRYNLVRGQGPERLVSGSDDFTLFLWSPAEDKKPLTRMTGHQALINQVLFSPDSRIVASASFDKSIKLWD 400 
WD40-rpts      ________________WD 8________________)(___________________WD 9__________________)

Query      401 GRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLAMDLPGHADEVYAVDWSPDGQRVASGGKDKCL 480 
WD40-rpts         (_________________WD10________________)   (_________________WD11_____________

Query      481 RIWRR 485 
WD40-rpts      ___) 

11 WD40-repeats found in QUERY=ENSP00000413572 (Len=485):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     2-41       7.90  440.98  7.1e-05       12.5%     32.26
  WD 2:  Seg  4    51-89       3.18  245.82  0.02989       20.0%     36.89
  WD 3:  Seg  8   104-142     10.76  559.15  1.8e-06       50.0%     51.25
  WD 4:  Seg 12   146-184     10.13  533.04  4.1e-06       42.5%     53.50
  WD 5:  Seg 16   185-232      8.26  455.67  4.5e-05       35.0%     48.05
  WD 6:  Seg 19   236-273      9.23  495.88  1.3e-05       50.0%     54.26
  WD 7:  Seg 23   277-315      8.42  462.53  3.6e-05       27.5%     56.43
  WD 8:  Seg 26   319-357      8.13  450.52  5.3e-05       27.5%     47.16
  WD 9:  Seg 30   358-400      9.56  509.47  8.5e-06       40.0%     54.36
  WD10:  Seg 34   404-442     10.62  553.19  2.2e-06       47.5%     57.29
  WD11:  Seg 38   446-484      9.70  515.54  7.0e-06       35.0%     49.81

Multiple sequence alignment of 11 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    2-41     AA---A---VPDEAVARDVQRLLVQF-----QDEGGQLLGSPF------DVPVDITP
   WD 2   51-89     -------------LLAQEDPLPLAFF-----VHDAEIVSSLGKTLESQAVETEKVLD
   WD 3  104-142    -T---R---CTSSLEGHSEAVISVAF-----SPTGKYLASGSG------DTTVRFWD
   WD 4  146-184    -E---T---PHFTCKGHRHWVLSISW-----SPDGRKLASGCK------NGQILLWD
   WD 5  185-232    PSTGKQ---VGRTLAGHSKWITGLSWEPLHANPECRYVASSSK------DGSVRIWD
   WD 6  236-273    -G---R---CERILTGHTQSVTCLRW-----GGDG-LLYSASQ------DRTIKVWR
   WD 7  277-315    -G---V---LCRTLQGHGHWVNTMAL-----STDYALRTGAFE------PAEASVNP
   WD 8  319-357    -Q---G---SLQELKERALSRYNLVR-----GQGPERLVSGSD------DFTLFLWS
   WD 9  358-400    PA---EDKKPLTRMTGHQALINQVLF-----SPDSRIVASASF------DKSIKLWD
   WD10  404-442    -G---K---YLASLRGHVAAVYQIAW-----SADSRLLVSGSS------DSTLKVWD
   WD11  446-484    -Q---K---LAMDLPGHADEVYAVDW-----SPDGQRVASGGK------DKCLRIWR

   WD40 Template    TG---E---CLRTLSGHTSGVTSVSF-----SPDGKRLVSGSE------DGTIKVWD