Input parameters:
Query = ENSP00000415894 (Len=768)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSP00000415894, Len=768):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 MSTREKNSQEGEYIKMFMRGRPITMFIPSDVDNYDDIRTELPPEKLKLEWAYGYRGKDCRANVYLLPTGKIVYFIASVVV 80
WD40-rpts
Query 81 LFNYEERTQRHYLGHTDCVKCLAIHPDKIRIATGQIAGVDKDGRPLQPHVRVWDSVTLSTLQIIGLGTFERGVGCLDFSK 160
WD40-rpts (_______________________WD 1______________________)(_____________________WD 2
Query 161 ADSGVHLCIIDDSNEHMLTVWDWQKKAKGAEIKTTNEVVLAVEFHPTDANTIITCGKSHIFFWTWSGNSLTRKQGIFGKY 240
WD40-rpts _____________________) (_________________WD 3________________)(_______________
Query 241 EKPKFVQCLAFLGNGDVLTGDSGGVMLIWSKTTVEPTPGKGPKGVYQISKQIKAHDGSVFTLCQMRNGMLLTGGGKDRKI 320
WD40-rpts _____WD 4____________________) (_________________WD 5_____________
Query 321 ILWDHDLNPEREIEVPDQYGTIRAVAEGKADQFLVGTSRNFILRGTFNDGFQIEVQGHTDELWGLATHPFKDLLLTCAQD 400
WD40-rpts ___)(___________________WD 6__________________)(_________________WD 7___________
Query 401 RQVCLWNSMEHRLEWTRLVDEPGHCADFHPSGTVVAIGTHSGRWFVLDAETRDLVSIHTDGNEQLSVMRYSIDGTFLAVG 480
WD40-rpts ______)(__________________WD 8_________________) (_________________WD 9_______
Query 481 SHDNFIYLYVVSENGRKYSRYGRCTGHSSYITHLDWSPDNKYIMSNSGDYEILYWDIPNGCKLIRNRSDCKDIDWTTYTC 560
WD40-rpts _________) (_________________WD10________________)
Query 561 VLGFQVFGVWPEGSDGTDINALVRSHNRKVIAVADDFCKVHLFQYPCSKAKAPSHKYSAHSSHVTNVSFTHNDSHLISTG 640
WD40-rpts (___________________WD11__________________) (_________________WD12________
Query 641 GKDMSIIQWKLVEKLSLPQNETVADTTLTKAPVSSTESVIQSNTPTPPPSQPLNETAEEESRISSSPTLLENSLEQTVEP 720
WD40-rpts _________) (_______________WD13______________
Query 721 SEDHSEEESEEGSGDLGEPLYEEPCNEISKEQAKATLLEDQQDPSPSS 768
WD40-rpts _)
13 WD40-repeats found in QUERY=ENSP00000415894 (Len=768):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 7 84-134 6.62 388.13 0.00037 35.0% 54.02
WD 2: Seg 11 135-182 5.87 357.13 0.00096 22.5% 48.79
WD 3: Seg 15 186-224 7.18 411.36 0.00018 15.0% 56.56
WD 4: Seg 19 225-270 5.19 328.97 0.00229 17.5% 46.56
WD 5: Seg 23 286-324 7.46 422.75 0.00012 22.5% 52.04
WD 6: Seg 27 325-367 5.79 353.64 0.00107 12.5% 52.12
WD 7: Seg 31 368-407 9.20 494.53 1.3e-05 17.5% 58.03
WD 8: Seg 35 408-448 6.73 392.51 0.00032 22.5% 57.78
WD 9: Seg 39 452-490 7.83 438.26 7.7e-05 20.0% 58.25
WD10: Seg 43 498-536 8.59 469.63 2.9e-05 35.0% 52.92
WD11: Seg 49 562-604 6.03 363.56 0.00078 7.5% 55.81
WD12: Seg 53 611-650 6.69 390.93 0.00034 32.5% 49.36
WD13: Seg 58 687-722 4.60 304.77 0.00485 17.5% 26.08
Multiple sequence alignment of 13 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 84-134 YE-------ERT----QRHY---LGHTDCVKCLAIHP-DKI----RIATGQIAGVDKDGRPLQPHVRVWD
WD 2 135-182 SV-------T-LSTLQIIGL---GTFERGVGCLDFSK-ADSGVHLCIIDDSNEH----------MLTVWD
WD 3 186-224 -K-------A-K----GAEI---KTTNEVVLAVEFHP-TDA----NTIITCGKS----------HIFFWT
WD 4 225-270 WSGNSLTRKQ-G----IFGK---YEKPKFVQCLAFLG-NGD----VLTGDS-GG----------VMLIWS
WD 5 286-324 -Y-------Q-I----SKQI---KAHDGSVFTLCQMR-NGM----LLTGGGKDR----------KIILWD
WD 6 325-367 HD----LNPE-R----EIEV---PDQYGTIRAVAEGK-ADQ----FLVGTSRNF----------ILRGTF
WD 7 368-407 ND-------G-F----QIEV---QGHTDELWGLATHP-FKD----LLLTCAQDR----------QVCLWN
WD 8 408-448 SM-------EHR----LEWT---RLVDEPGHCADFHP-SGT----VVAIGTHSG----------RWFVLD
WD 9 452-490 -R-------D-L----VSIH---TDGNEQLSVMRYSI-DGT----FLAVGSHDN----------FIYLYV
WD10 498-536 -Y-------S-R----YGRC---TGHSSYITHLDWSP-DNK----YIMSNSGDY----------EILYWD
WD11 562-604 LG-------F-Q----VFGVWPEGSDGTDINALVRSH-NRK----VIAVADDFC----------KVHLFQ
WD12 611-650 -K-------A-P----SHKY---SAHSSHVTNVSFTHNDSH----LISTGGKDM----------SIIQWK
WD13 687-722 -P-------P-P----SQPL---NETAEEESRISSSP-T-------LLENSLEQ----------TVEPSE
WD40 Template TG-------E-C----LRTL---SGHTSGVTSVSFSP-DGK----RLVSGSEDG----------TIKVWD