Input parameters:
Query = ENSP00000422763 (Len=1283)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSP00000422763, Len=1283):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 MSQVRQVGLLAAGCQPWNKDVCAASGDRFAYCATLAIYIYQLDHRYNEFKLHAIMSEHKKTITAISWCPHNPDLFASGST 80
WD40-rpts (_________________WD 1________________) (_________________WD 2__________
Query 81 DNLVIIWNVAEQKVIAKLDSTKGIPASLSWCWNAEDVVAFVSHRGPLFIWTISGPDSGVIVHKDAHSFLSDICMFRWHTH 160
WD40-rpts _______) (_________________WD 3_________________) (__________________WD 4_
Query 161 QKGKVVFGHIDGSLSIFHPGNKNQKHVLRPESLEGTDEEDPVTALEWDPLSTDYLLVVNLHYGIRLVDSESLSCITTFNL 240
WD40-rpts _________________) (__________________WD 5_________________)(___________
Query 241 PSAAASVQCLAWVPSAPGMFITGDSQVGVLRIWNVSRTTPIDNLKLKKTGFHCLHVLNSPPRKKFSVQSPTKNHYTSSTS 320
WD40-rpts _________WD 6____________________) (__________________WD 7_________________)(_
Query 321 EAVPPPTLTQNQAFSLPPGHAVCCFLDGGVGLYDMGAKKWDFLRDLGHVETIFDCKFKPDDPNLLATASFDGTIKVWDIN 400
WD40-rpts ______________WD 8_______________)(___________________WD 9___________________)
Query 401 TLTAVYTSPGNEGVIYSLSWAPGGLNCIAGGTSRNGAFIWNVQKGKIIQRFNEHGTNGIFCIAWSHKDSKRIATCSSDGF 480
WD40-rpts (_________________WD10_________________) (__________________WD11_____________
Query 481 CIIRTIDGKVLHKYKHPAAVFGCDWSQNNKDMIATGCEDTNVRVYYVATSSDQPLKVFSGHTAKVFHVKWSPLREGILCS 560
WD40-rpts ____)(__________________WD12_________________) (_________________WD13_______
Query 561 GSDDGTVRIWDYTQDACINILNGHTAPVRGLMWNTEIPYLLISGSWDYTIKVWDTREGTCVDTVYDHGADVYGLTCHPSR 640
WD40-rpts __________) (_________________WD14_________________) (_________________WD15_
Query 641 PFTMASCSRDSTVRLWSLTALVTPVQINILADRSWEEIIGNTDYAIEPGTPPLLCGKVSRDIRQEIEKLTANSQVKKLRW 720
WD40-rpts ________________) (________________WD16________________)
Query 721 FSECLSPPGGSDNLWNLVAVIKGQDDSLLPQNYCKGIMHLKHLIKFRTSEAQELTTVKMSKFGGGIGVPAKEERLKEAAE 800
WD40-rpts (________________________WD17_____________
Query 801 IHLRLGQIQRYCELMVELGEWDKALSIAPGVSVKYWKKLMQRRADQLIQEDKDDVIPYCIAIGDVKKLVHFFMSRGQLKE 880
WD40-rpts ___________)
Query 881 ALLVAQAACEGNMQPLHVSVPKGASYSDDIYKEDFNELLHKVSKELAEWYFQDGRAVLAACCHLAIDNIELAMAYLIRGN 960
WD40-rpts
Query 961 ELELAVCVGTVLGESAAPATHYALELLARKCMMISVWNLAADLLLMIPDNELHLIKLCAFYPGCTEEINDLHDKCKLPTV 1040
WD40-rpts
Query 1041 EECMQLAETARADDNIFETVKYYLLSQEPEKALPIGISFVKEYISSSDWTLDTIYPVLDLLSYIRTEKLLLHTCTEARNE 1120
WD40-rpts
Query 1121 LLILCGYIGALLAIRRQYQSIVPALYEYTSQLLKRREVSVPLKIEYLSEELDAWRACTQSTNRSLEDSPYTPPSDSQRMI 1200
WD40-rpts
Query 1201 YATLLKRLKEESLKGIIGPDYVTGSNLPSHSDIHISCLTGLKIQGPVFFLEDGKSAISLNDALMWAKVNPFSPLGTGIRL 1280
WD40-rpts
Query 1281 NPF 1283
WD40-rpts
17 WD40-repeats found in QUERY=ENSP00000422763 (Len=1283):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 1 3-41 3.11 243.14 0.03244 10.0% 41.84
WD 2: Seg 5 49-88 6.27 373.63 0.00057 25.0% 49.63
WD 3: Seg 9 92-131 5.42 338.52 0.00170 15.0% 55.41
WD 4: Seg 13 137-178 4.34 293.97 0.00678 15.0% 54.79
WD 5: Seg 18 188-228 5.78 353.25 0.00108 15.0% 44.30
WD 6: Seg 21 229-274 5.63 347.18 0.00130 17.5% 50.44
WD 7: Seg 25 278-318 4.37 295.35 0.00650 17.5% 50.40
WD 8: Seg 29 319-354 5.27 332.32 0.00207 20.0% 43.52
WD 9: Seg 32 355-398 7.31 416.69 0.00015 40.0% 51.64
WD10: Seg 36 402-441 6.31 375.11 0.00055 20.0% 56.26
WD11: Seg 40 445-485 5.73 351.55 0.00114 27.5% 54.37
WD12: Seg 44 486-526 6.61 387.55 0.00037 20.0% 54.87
WD13: Seg 48 532-571 8.30 457.38 4.3e-05 45.0% 52.09
WD14: Seg 52 575-614 8.06 447.67 5.8e-05 42.5% 54.71
WD15: Seg 56 618-657 7.41 420.67 0.00013 27.5% 53.85
WD16: Seg 61 669-706 3.39 254.73 0.02275 15.0% 36.21
WD17: Seg 68 759-812 3.06 241.09 0.03454 15.0% 32.08
Multiple sequence alignment of 17 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 3-41 QVR---Q----VGLLAAG-CQPW--NKDVC---A-A-S--G-D-RFAYCAT-------------L-AIYIYQ
WD 2 49-88 -FK---L----HAIMSEH-KKTI--TAISW---C-PHN--P-D-LFASGST-------------DNLVIIWN
WD 3 92-131 -QK---V----IAKLDST-KGIP--ASLSW---C-W-N--A-EDVVAFVSH-------------RGPLFIWT
WD 4 137-178 -SG---V----IVHKDAH-SFLS--DICMFRWHT-H-Q--K-G-KVVFGHI-------------DGSLSIFH
WD 5 188-228 LRP---E----SLEGTDE-EDPV--TALEW---D-PLS--T-D-YLLVVNL-------------HYGIRLVD
WD 6 229-274 SES---LSCITTFNLPSA-AASV--QCLAW---V-P-SAPG-M-FITGDSQ-------------VGVLRIWN
WD 7 278-318 -TT---P----IDNLKLK-KTGFHCLHVLN---S-P-P--R-K-KFSVQSP-------------TKNHYTSS
WD 8 319-354 TSE---A----V----PP-PTLT--QNQAF---S-L-P--P-G-HAVCCFL-------------DGGVGLYD
WD 9 355-398 MGAKKWD----FLRDLGH-VETI--FDCKF---K-P-D--DPN-LLATASF-------------DGTIKVWD
WD10 402-441 -LT---A----VYTSPGN-EGVI--YSLSW---A-P-G--GLN-CIAGGTS-------------RNGAFIWN
WD11 445-485 -GK---I----IQRFNEHGTNGI--FCIAW---SHK-D--S-K-RIATCSS-------------DGFCIIRT
WD12 486-526 IDG---K----VLHKYKH-PAAV--FGCDW---S-Q-N--N-KDMIATGCE-------------DTNVRVYY
WD13 532-571 -DQ---P----LKVFSGH-TAKV--FHVKW---S-P-L--R-EGILCSGSD-------------DGTVRIWD
WD14 575-614 -DA---C----INILNGH-TAPV--RGLMW---N-T-E-IP-Y-LLISGSW-------------DYTIKVWD
WD15 618-657 -GT---C----VDTVYDH-GADV--YGLTC---H-P-S--R-PFTMASCSR-------------DSTVRLWS
WD16 669-706 I-----L----ADRSWEE-IIGN--TDYAI---E-P-G--T-P-PLLCGKV-------------SRDIRQEI
WD17 759-812 HLK--HL----IKFRTSE-AQEL--TTVKM---S-K-F--G-G-GIGVPAKEERLKEAAEIHLRLGQIQRYC
WD40 Template TGE---C----LRTLSGH-TSGV--TSVSF---S-P-D--G-K-RLVSGSE-------------DGTIKVWD