Input parameters:

  Query = ENSMUSP00000030145 (Len=453)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSMUSP00000030145, Len=453):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MARKAVSRKRKASASPGAGSDAQGPQFGWDHSLHKRKRLPPVKRSLVYYLKNREVRLQNETSYSRLLHGYAAQQLPSLLK 80  
WD40-rpts                                                                                    (_

Query       81 EREFHLGTLNKVFASQWLNHRQVVCGTKCNTLFVVDVQTGQITKIPILKDREPGGVTQQGCGIHAIELNPSRTLLATGGD 160 
WD40-rpts      _______________WD 1________________)             (_________________WD 2_________

Query      161 NPNSLAIYRLPTLDPVCVGDDGHKDWIFSIAWINDTMAVSGSRDGSMGLWEVTDDVLTKSDARHNVSPVPVYAHITHKAL 240 
WD40-rpts      ________)    (________________WD 3________________)                             

Query      241 KDIPKEDTNPDNCKVRALAFNNKNKELGAVSLDGYFHLWKAENTLSKLLSTKLPYCRENVCLAYGSEWSVYAVGSQAHVS 320 
WD40-rpts       (_________________WD 4________________)     (_________________WD 5_____________

Query      321 FLDPRQPSYNVKSVCSRERGSGIRSVSFYEHIITVGTGQGSLLFYDIRAQRFLEERLSACYGSKPRLAGENLKLTTGRGW 400 
WD40-rpts      ___)  (_________________WD 6_________________)(_________________WD 7____________

Query      401 LNHDETWRNYFSDIDFFPNAVYTHCYDSSGTKLFVAGGPLPSGLHGNYAGLWS 453 
WD40-rpts      ____)                                                

7 WD40-repeats found in QUERY=ENSMUSP00000030145 (Len=453):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1    79-116      5.05  323.43  0.00272       17.5%     47.94
  WD 2:  Seg  6   130-169      6.42  379.87  0.00047       10.0%     38.82
  WD 3:  Seg  9   174-211      7.05  406.03  0.00021       27.5%     49.70
  WD 4:  Seg 14   242-280      8.11  449.50  5.4e-05       20.0%     42.72
  WD 5:  Seg 17   286-324      5.02  322.07  0.00284       10.0%     42.99
  WD 6:  Seg 21   327-366      5.08  324.57  0.00263       12.5%     45.57
  WD 7:  Seg 25   367-405      5.36  335.97  0.00185       15.0%     24.32

Multiple sequence alignment of 7 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   79-116    LKEREFHLGTLNKVFAS-QWL-NHRQVVCGTKC-NTLFVVD
   WD 2  130-169    DREPGGVTQQGCGIHAI-ELNPSRTLLATGGDNPNSLAIYR
   WD 3  174-211    DPVCVGDDGHKDWIFSI-AWIND-TMAVSGSRD-GSMGLWE
   WD 4  242-280    DIPKEDTNPDNCKVRAL-AFNNKNKELGAVSLD-GYFHLWK
   WD 5  286-324    SKLLSTKLPYCRENVCL-AYGSEWSVYAVGSQA-HVSFLDP
   WD 6  327-366    PSYNVKSVCSRERGSGIRSVSFYEHIITVGTGQ-GSLLFYD
   WD 7  367-405    IRAQRFLEERLSACYGS-KPRLAGENLKLTTGR-GWLNHDE

   WD40 Template    GECLRTLSGHTSGVTSV-SFSPDGKRLVSGSED-GTIKVWD