Input parameters:

  Query = ENSMUSP00000030312 (Len=419)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSMUSP00000030312, Len=419):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MLTGSADKTIKLWKAGRCERTFLGHEDCVRGLAILSETEFLSCANDASIRRWQITGECLEVYFGHTNYIYSISVFPNSKD 80  
WD40-rpts                     (________________WD 1________________)  (_________________WD 2___

Query       81 FVTTAEDRSLRIWKHGECAQTIRLPAQSIWCCCVLENGDIVVGASDGIIRVFTESEERTASAEEIKAFERELSQATIDSK 160 
WD40-rpts      _____________)(_________________WD 3________________)                    (______

Query      161 TGDLGDINAEQLPGREHLSEPGTREGQTRLIRDGERVEAYQWSVSDGRWIKIGDVVGSSGANQQTSGKVLYEGKEFDYVF 240 
WD40-rpts      ___________WD 4________________)(_______________________WD 5____________________

Query      241 SIDVNEGGPSYKLPYNVSDDPWLVAYNFLQKNDLNPMFLDQVAKFIIDNTKGQTLGLGNTSFSDPFTGAGRYMPGSAGMD 320 
WD40-rpts      __)                                                                             

Query      321 TTMTGVDPFTGNSAYRSAASKTVNIYFPKKEALTFDQANPTQILGKLKELNGTAPEEKKLTEDDLVLLEKILSLICNNSS 400 
WD40-rpts                                                                                      

Query      401 EKPTAQQLQILWKAINWPE 419 
WD40-rpts                         

5 WD40-repeats found in QUERY=ENSMUSP00000030312 (Len=419):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  2    16-53       7.31  416.56  0.00015       27.5%     50.31
  WD 2:  Seg  6    56-94      10.14  533.42  4.0e-06       37.5%     54.76
  WD 3:  Seg 10    95-133      8.53  466.99  3.2e-05       27.5%     53.99
  WD 4:  Seg 14   154-192      5.86  356.83  0.00097        7.5%     38.34
  WD 5:  Seg 18   193-243      4.32  293.31  0.00692       27.5%     35.40

Multiple sequence alignment of 5 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   16-53     -GRCER-----TFLGHEDCVRGLAILSE------TE-FLSCANDASIRRWQ
   WD 2   56-94     -GECLE-----VYFGHTNYIYSISVFPN------SKDFVTTAEDRSLRIWK
   WD 3   95-133    HGECAQ-----TIRLPAQSIWCCCVLEN------GD-IVVGASDGIIRVFT
   WD 4  154-192    -QATID-----SKTGDLGDINAEQLPGR------EHLSEPGTREGQTRLIR
   WD 5  193-243    DGERVEAYQWSVSDGRWIKIGDVVGSSGANQQTSGKVLYEGKEFDYVFSID

   WD40 Template    TGECLR-----TLSGHTSGVTSVSFSPD------GKRLVSGSEDGTIKVWD