Input parameters:

  Query = ENSMUSP00000038137 (Len=341)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSMUSP00000038137, Len=341):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MEHAAPLAVPLGQAEVFQALQRLHMTIFSQSVSPCGKFLAAGNNYGQIAIFSLSAALSSEAKEESKKPVVVFHAHDGPVY 80  
WD40-rpts                  (_________________WD 1_________________)             (______________

Query       81 SMVSTDRHLLSAGDGEVKGWLWAEILKKGCKELWRRQPPYRTSLEVPEINALLLVPKENSLILAGGDCQLHSMDLETGAF 160 
WD40-rpts      __WD 2________________)            (_________________WD 3________________)   (__

Query      161 TRALRGHTDYIHCLALRERSPEVLSGGEDGAVRLWDLRIAKEVQTIEVYKHEECSRPHNGRWIGCLATDSDWMVCGGGPA 240 
WD40-rpts      _______________WD 4________________)   (____________________WD 5________________

Query      241 LTLWHLRSSTPTTVFPIRAPQKHVTFYQDLILSAGQGCCVNHWQLSGELKAQVPGSSPGLLSLSLNQQPAAPECKVLTAS 320 
WD40-rpts      ____)   (_______________WD 6_______________)  (___________________WD 7__________

Query      321 GNSCRVDVFTNLGYRAFSLSF 341 
WD40-rpts      _________)           

7 WD40-repeats found in QUERY=ENSMUSP00000038137 (Len=341):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1    13-52       8.78  477.36  2.3e-05       30.0%     49.36
  WD 2:  Seg  5    66-103      6.53  384.41  0.00041       20.0%     48.21
  WD 3:  Seg  9   116-154      7.39  420.05  0.00014       12.5%     46.28
  WD 4:  Seg 12   158-196     10.20  536.15  3.7e-06       32.5%     54.21
  WD 5:  Seg 16   200-245      5.52  342.83  0.00149       15.0%     46.81
  WD 6:  Seg 20   249-284      4.99  320.75  0.00296       12.5%     53.44
  WD 7:  Seg 24   287-330      7.79  436.50  8.1e-05       25.0%     55.45

Multiple sequence alignment of 7 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   13-52     QAEVFQALQRLHMTIFSQ--------SV-----SPCGKFLAAGNNYGQIAIFS
   WD 2   66-103    -KKPVVVFHAHDGPVYSM---------V-----STDRHLLSAGDGEVKGWLWA
   WD 3  116-154    -RQPPYRTSLEVPEINAL--------LL-----VPKENSLILAGGDCQLHSMD
   WD 4  158-196    -GAFTRALRGHTDYIHCL--------AL-----RERSPEVLSGGEDGAVRLWD
   WD 5  200-245    -AKEVQTIEVYKHEECSRPHNGRWIGCL-----ATDSDWMVCGG-GPALTLWH
   WD 6  249-284    -STPTTVFPIRAP-QKHV--------TF-----YQD--LILSAGQGCCVNHWQ
   WD 7  287-330    -GELKAQVPGSSPGLLSL--------SLNQQPAAPECKVLTASGNSCRVDVFT

   WD40 Template    TGECLRTLSGHTSGVTSV--------SF-----SPDGKRLVSGSEDGTIKVWD