Input parameters:

  Query = ENSMUSP00000043315 (Len=384)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSMUSP00000043315, Len=384):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MATASARWNHVWVGTETGILKGVNLQRKHAANFTPSGQPRREEAVNALCWGTGGETQILVGCADRTVRYFNAEEGTFLSQ 80  
WD40-rpts                                     (_________________WD 1_________________)   (_____

Query       81 RYCPGGEGTFRGLAQADGTLITCVDSGILRVWCENDKEASSDPLLELKVGPGVCRMRQDPTHTHVVATCGKENALKVWDL 160 
WD40-rpts      ____________WD 2________________)       (_________________WD 3________________) 

Query      161 QGSEEPVFRAKNVRNDWLDLRVPIWDQDTQFLPGSQKLVTCTGYHQVRVYDPVSPQRRPVLEATYGEYPLTAMTLTPEGN 240 
WD40-rpts               (__________________WD 4__________________)     (_________________WD 5__

Query      241 SVIVGNTHGQLAEIDFRQGRLLGCLKGLAGSVRGLQCHPSKPLLASCGLDRVLRIHRIRNPRGLEHKVYLKSQLNCLLLS 320 
WD40-rpts      ______________)   (_________________WD 6________________)   (___________________

Query      321 GRDNWEDEPQEPQEPNQVPSEDTETDELWASLEAAAKRKLPDLDQTQGALQRRKKKKRPGSTSP 384 
WD40-rpts      _________WD 7___________________________)                       

7 WD40-repeats found in QUERY=ENSMUSP00000043315 (Len=384):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  3    32-71       6.65  389.23  0.00035       12.5%     42.85
  WD 2:  Seg  6    75-113      8.28  456.58  4.4e-05       17.5%     56.84
  WD 3:  Seg 10   121-159      7.84  438.60  7.6e-05       15.0%     51.48
  WD 4:  Seg 15   170-211      6.49  382.92  0.00043       15.0%     41.83
  WD 5:  Seg 18   217-255      7.40  420.37  0.00013       15.0%     53.39
  WD 6:  Seg 22   259-297      8.93  483.58  1.9e-05       22.5%     59.08
  WD 7:  Seg 25   301-361      3.78  271.00  0.01379       15.0%     17.92

Multiple sequence alignment of 7 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   32-71     -NFTPS--GQPRREEAVNALCWG-----------TGGETQILVGCADRT-----------VRYFN
   WD 2   75-113    -GTFLS--QRYCPGGEGTFRGLA-----------QADG-TLITCVDSGI-----------LRVWC
   WD 3  121-159    -SDPLL--ELKVGPGVCRMRQDP-----------THTH-VVATCGKENA-----------LKVWD
   WD 4  170-211    AKNVRNDWLDLRVPIWDQDTQFL-----------PGSQ-KLVTCTGYHQ-----------VRVYD
   WD 5  217-255    -RRPVL--EATYGEYPLTAMTLT-----------PEGN-SVIVGNTHGQ-----------LAEID
   WD 6  259-297    -GRLLG--CLKGLAGSVRGLQCH-----------PSKP-LLASCGLDRV-----------LRIHR
   WD 7  301-361    -PRGLE--HKVYLKSQLNCLLLSGRDNWEDEPQEPQEP-NQVPSEDTETDELWASLEAAAKRKLP

   WD40 Template    TGECLR--TLSGHTSGVTSVSFS-----------PDGK-RLVSGSEDGT-----------IKVWD