Input parameters:

  Query = ENSMUSP00000048204 (Len=528)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSMUSP00000048204, Len=528):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MAGYKPVAIQTYPVLGEKITQDTLYWNNYKTPVQIKEFGAVSKVDFSPQLPYNYAVTASSRIHIYGRYSQEPVKTFSRFK 80  
WD40-rpts                               (__________________WD 1_________________)   (__________

Query       81 DTAYCATFRQDGQLLVAGSEDGVVQLFDINGRAPLRQFEGHTKAVHTVDFTADNYHVVSGADDYTVKLWDIPNSKEILTF 160 
WD40-rpts      _______WD 2________________)   (_________________WD 3________________)   (______

Query      161 KEHSDYVRCGCASKLNPDLFVTGSYDHTVKIFDARTNKNVLCVEHGQPVESVLLFPSGGLLVSAGGRYVKVWDMLKGGQL 240 
WD40-rpts      ___________WD 4_________________)(_________________WD 5_________________)    (__

Query      241 LVSLKNHHKTVTCLCLSSSGQRLLSGSLDRKVKVYSTTSYKVVHSFDYAASILSLALSHQDETIVVGMTNGILSVKHRKS 320 
WD40-rpts      _______________WD 6________________)(__________________WD 7_________________)   

Query      321 EAKKTSLPRRRRPAYRTFIKGKNYLKQRDDIMVSRPAKKHLEGYDKDLKSFRVSQALDRVLEPKCVIRTPEVTVSIIKEL 400 
WD40-rpts                                                                                      

Query      401 TRRGVLANALAGRDEKEVTRVLNFLIRNLSQPRFAPVLINAAEIIIDIYLPVIGQSSVVDKKFIVLQELVEKEIDYQREL 480 
WD40-rpts                                                                                      

Query      481 LETLGMMDMLFATMTRNDSDPVPEHVPAELPEEKTESPTQPSDTDKNS 528 
WD40-rpts                                                      

7 WD40-repeats found in QUERY=ENSMUSP00000048204 (Len=528):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  3    26-66       6.17  369.52  0.00065       15.0%     46.25
  WD 2:  Seg  7    70-108      8.85  480.06  2.1e-05       35.0%     56.51
  WD 3:  Seg 11   112-150      9.97  526.31  5.0e-06       42.5%     55.51
  WD 4:  Seg 15   154-193      7.59  428.23  0.00011       27.5%     55.72
  WD 5:  Seg 19   194-233      6.57  386.08  0.00039       35.0%     49.70
  WD 6:  Seg 23   238-276      9.53  508.20  8.8e-06       40.0%     57.81
  WD 7:  Seg 27   277-317      6.81  395.95  0.00029       20.0%     53.62

Multiple sequence alignment of 7 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   26-66     WNNYKTPVQI-KEFGAVSKVDFSP-QLPYNYAVTASSRIHIYG
   WD 2   70-108    -QEPVK-TFS-RFKDTAYCATFRQ-DGQLLVAGSEDGVVQLFD
   WD 3  112-150    -RAPLR-QFE-GHTKAVHTVDFTA-DNYHVVSGADDYTVKLWD
   WD 4  154-193    -SKEIL-TFK-EHSDYVRCGCASKLNPDLFVTGSYDHTVKIFD
   WD 5  194-233    ARTNKN-VLCVEHGQPVESVLLFP-SGGLLVSAG-GRYVKVWD
   WD 6  238-276    -GQLLV-SLK-NHHKTVTCLCLSS-SGQRLLSGSLDRKVKVYS
   WD 7  277-317    TTSYKV-VHSFDYAASILSLALSH-QDETIVVGMTNGILSVKH

   WD40 Template    TGECLR-TLS-GHTSGVTSVSFSP-DGKRLVSGSEDGTIKVWD