Input parameters:

  Query = ENSMUSP00000085019 (Len=180)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSMUSP00000085019, Len=180):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 HASSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGE 80  
WD40-rpts                     (_________________WD 1________________)(__________________WD 2___

Query       81 WLAVGMENSNVEVLHVTKPDKYQLHLHESCVLSLKFAHCGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISVD 160 
WD40-rpts      ______________)(__________________WD 3_________________)(__________________WD 4_

Query      161 DKYIVTGSGDKKATVYEVIY 180 
WD40-rpts      ________________)   

4 WD40-repeats found in QUERY=ENSMUSP00000085019 (Len=180):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  2    16-54      10.35  542.03  3.1e-06       35.0%     53.61
  WD 2:  Seg  6    55-95       8.10  449.15  5.5e-05       25.0%     54.08
  WD 3:  Seg 10    96-136      8.93  483.59  1.9e-05       30.0%     54.47
  WD 4:  Seg 14   137-177      8.28  456.52  4.4e-05       32.5%     56.14

Multiple sequence alignment of 4 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   16-54     -QT-LVRQFQ-GHTDGASCIDISNDGTKLWTGGLDNTVRSWD
   WD 2   55-95     LRE-GRQLQQHDFTSQIFSLGYCPTGEWLAVGMENSNVEVLH
   WD 3   96-136    VTKPDKYQLH-LHESCVLSLKFAHCGKWFVSTGKDNLLNAWR
   WD 4  137-177    TPYGASIFQS-KESSSVLSCDISVDDKYIVTGSGDKKATVYE

   WD40 Template    TGE-CLRTLS-GHTSGVTSVSFSPDGKRLVSGSEDGTIKVWD