Input parameters:

  Query = ENSMUSP00000095619 (Len=514)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSMUSP00000095619, Len=514):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MFPQSRHPTPHQAAGQPFKFTIPESLDRIKEEFQFLQAQYHSLKLECEKLASEKTEMQRHYVMYYEMSYGLNIEMHKQTE 80  
WD40-rpts                                                                                      

Query       81 IAKRLNTICAQVIPFLSQEHQQQVAQAVERAKQVTMAELNAIIGSNSLLVPDSLRGTDKRRNGPEFSSDIKKRKVDDKDN 160 
WD40-rpts                                                                                      

Query      161 YDSDGDKSDDNLVVDVSNEDPSSPHASPTHSPRENGIDKNRLLKKDASGSPASTASSGSSSSLKSKEVSLHEKANTPVLK 240 
WD40-rpts                                                                                      

Query      241 SSTPTPRSDMPTPGTSATPGLRPGLGKPPAMEPLVNQAAAGLRTPLAVPGPYPAPFGMVPHAGMNGELTSPGAAYAGLHS 320 
WD40-rpts                                                                                      

Query      321 MSPQMSAAAAAAAAAVVAYGRSPMVGFDPPPHMRVPSIPPNLAGIPGGKPAYSFHVTADGQMQPVPFPPDALIGPGIPRH 400 
WD40-rpts                        (_____________________WD 1_____________________)(_____________

Query      401 ARQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQS 480 
WD40-rpts      ______WD 2__________________)(__________________WD 3_________________)(_________

Query      481 KESSSVLSCDISVDDKYIVTGSGDKKATVYEVIY 514 
WD40-rpts      _________WD 4_________________)   

4 WD40-repeats found in QUERY=ENSMUSP00000095619 (Len=514):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1   339-386      3.01  239.17  0.03662        7.5%     29.44
  WD 2:  Seg  3   387-429      7.71  433.00  9.1e-05       20.0%     42.86
  WD 3:  Seg  6   430-470      8.34  459.05  4.0e-05       30.0%     53.75
  WD 4:  Seg 10   471-511      7.68  432.01  9.4e-05       32.5%     49.70

Multiple sequence alignment of 4 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  339-386    YGR---SPMVGFDPPPHMR-VPSIPPNLAGIPGGKPAYSFHVTADGQMQPVP
   WD 2  387-429    FPPDALIG--------PGI-PRHARQIFSLGYCPTGEWLAVGMESSNVEVLH
   WD 3  430-470    VNK--PDK--------YQL-HLHESCVLSLKFAYCGKWFVSTGKDNLLNAWR
   WD 4  471-511    TPY---GA--------SIFQSKESSSVLSCDISVDDKYIVTGSGDKKATVYE

   WD40 Template    TGE---CL--------RTL-SGHTSGVTSVSFSPDGKRLVSGSEDGTIKVWD