Input parameters:

  Query = ENSMUSP00000101265 (Len=225)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSMUSP00000101265, Len=225):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MYRRGLVQVWSLEQPEWHCKIDEGSAGLVASCWSPDGRHILNTTEFHLRITVWSLCTKSVSYIKYPKACQQGLTFTRDGR 80  
WD40-rpts                    (_________________WD 1_________________)  (_________________WD 2__

Query       81 YLALAERRDCRDYVSIFVCSDWQLLRYKVLLYSLDGRLLSAYCAYEWSLGIKSVAWSPSSQFLAIGSYDGKVRLLNHVTW 160 
WD40-rpts      ______________)                    (__________________WD 3_________________)  (_

Query      161 KMITEFGHPATINNPKTVVYKEAEKSPLLGLGHLSFPPPRAMAGALSTSESKYEIASGPVSLQTL 225 
WD40-rpts      ______________WD 4______________)                                

4 WD40-repeats found in QUERY=ENSMUSP00000101265 (Len=225):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  2    15-54       7.51  424.84  0.00012       25.0%     56.10
  WD 2:  Seg  6    57-95       7.36  418.62  0.00014       10.0%     49.57
  WD 3:  Seg 11   116-156      8.08  448.51  5.6e-05       30.0%     57.18
  WD 4:  Seg 15   159-193      4.36  294.61  0.00665       10.0%     43.69

Multiple sequence alignment of 4 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   15-54     PEWHCKIDEG--SAGLVASCWSPDGRHILNTTEFHLRITVWS
   WD 2   57-95     TKSVSYIKYP--KACQQGLTFTRDGRYLALAERRD-CRDYVS
   WD 3  116-156    GRLLSAYCAYEWSLGIKSVAWSPSSQFLAIGSYDG-KVRLLN
   WD 4  159-193    TWKMITEFGH--PATI----NNPKTVVYKEAEKSP-LLGLGH

   WD40 Template    GECLRTLSGH--TSGVTSVSFSPDGKRLVSGSEDG-TIKVWD