Input parameters:

  Query = ENSMUSP00000101615 (Len=192)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSMUSP00000101615, Len=192):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MIEQQKRKGPELPLVPVKRPRHELLLGAAGAGPGAGPQQATPGALLQAGPPRCSSLQAPIMLLSGHEGEVYCCKFHPNGS 80  
WD40-rpts      (_________________________WD 1________________________) (_________________WD 2__

Query       81 TLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYP 160 
WD40-rpts      ______________)    (_________________WD 3________________)   (_________________W

Query      161 ARRGPQLVCTGSDDGTVKVKGRLVPGVGATLL 192 
WD40-rpts      D 4_________________)           

4 WD40-repeats found in QUERY=ENSMUSP00000101615 (Len=192):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     1-55       3.42  255.80  0.02202        7.5%      3.34
  WD 2:  Seg  2    57-95       9.45  505.09  9.7e-06       32.5%     47.06
  WD 3:  Seg  6   100-138      9.98  527.00  4.9e-06       37.5%     49.93
  WD 4:  Seg 10   142-181      9.08  489.76  1.6e-05       45.0%     48.02

Multiple sequence alignment of 4 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    1-55     MIEQQKRKGPELPLVPVKRPRHELLLGAAGAGPGAGPQQATP-GALLQAGPPRCSS
   WD 2   57-95     -QAPIMLLSGH---------------EGEVYCCKFHPNGSTL-ASAGFDRLILLWN
   WD 3  100-138    -CDNYATLKGH---------------SGAVMELHYNTDGSML-FSASTDKTVAVWD
   WD 4  142-181    -GERVKRLKGH---------------TSFVNSCYPARRGPQLVCTGSDDGTVKVKG

   WD40 Template    TGECLRTLSGH---------------TSGVTSVSFSPDGKRL-VSGSEDGTIKVWD