Input parameters:

  Query = ENSMUSP00000101716 (Len=218)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSMUSP00000101716, Len=218):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MNLLPCNPHGNGLLYAGFNQDHGCFACGMENGFRVYNTDPLKEKEKQEFLEGGVGHVEMLFRCNYLALVGGGKKPKYPPN 80  
WD40-rpts      (________________WD 1_______________)   (____________________WD 2_______________

Query       81 KVMIWDDLKKKTVIEIEFSTEVKAVKLRRDRIVVVLDSMIKVFTFTHNPHQLHVFETCYNPKGLCVLCPNSNNSLLAFPG 160 
WD40-rpts      _____)(________________WD 3________________)    (__________________WD 4_________

Query      161 THTGHVQLVDLASTEKPPVDIPAHEGVLSCIALNLQGTRIATASEKSLRRPHRVYLVL 218 
WD40-rpts      _________)(___________________WD 5__________________)     

5 WD40-repeats found in QUERY=ENSMUSP00000101716 (Len=218):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     1-37       5.52  342.55  0.00150       17.5%     42.57
  WD 2:  Seg  4    41-86       4.58  303.71  0.00502       15.0%     38.36
  WD 3:  Seg  8    87-124      3.32  251.63  0.02502       20.0%     40.49
  WD 4:  Seg 12   129-170      4.17  286.95  0.00843       15.0%     45.30
  WD 5:  Seg 16   171-213      7.36  418.58  0.00014       12.5%     52.27

Multiple sequence alignment of 5 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    1-37     MN-----LLPCN-PHGN--GLLYAGFNQDHGCFA-------CGM-ENGFRVYN
   WD 2   41-86     -L---KEKEKQE-FLEG--GVGHVEMLFRCNYLALVGGGKKPKYPPNKVMIWD
   WD 3   87-124    DL---KKKTVIEIEFST--EVKAVKLRRDRIVVV-------L---DSMIKVFT
   WD 4  129-170    -P---HQLHVFE-TCYNPKGLCVLCPNSNNSLLA------FPGTHTGHVQLVD
   WD 5  171-213    LASTEKPPVDIP-AHEG--VLSCIALNLQGTRIA-------TASEKSLRRPHR

   WD40 Template    TG---ECLRTLS-GHTS--GVTSVSFSPDGKRLV-------SGSEDGTIKVWD