Input parameters:

  Query = ENSMUSP00000114811 (Len=194)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSMUSP00000114811, Len=194):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MVRLIHTLADHGDDVSCCAFSAALLATCSLDKTIRLYSLSDFAELPYSPLKFHTYAVHCCCFSPSGHVLASCSTDGTTVL 80  
WD40-rpts      (________________WD 1________________)(___________________WD 2__________________

Query       81 WSSHSGHTLTVLEQPGGSPVRVCCFSPDSAYLASGAADGSIALWNAQTYKLYRCGSVKDSSLVACAFSPDGGLFVTGSSG 160 
WD40-rpts      _)   (_________________WD 3_________________)   (_________________WD 4__________

Query      161 GDLTVWDDRMRCLHSEKAHDLGITCCSFSSQPLS 194 
WD40-rpts      ______)                           

4 WD40-repeats found in QUERY=ENSMUSP00000114811 (Len=194):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     1-38       8.46  463.98  3.5e-05       27.5%     49.53
  WD 2:  Seg  5    39-82       9.25  496.93  1.2e-05       37.5%     43.97
  WD 3:  Seg  8    86-125      8.72  474.97  2.5e-05       40.0%     55.64
  WD 4:  Seg 12   129-167     10.00  527.70  4.8e-06       37.5%     56.13

Multiple sequence alignment of 4 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    1-38     MVR----LIHTLADH-GDDVSCCAFS--AALLATCSLDKTIRLYS
   WD 2   39-82     LSDFAELPYSPLKFH-TYAVHCCCFSPSGHVLASCSTDGTTVLWS
   WD 3   86-125    -GH----TLTVLEQPGGSPVRVCCFSPDSAYLASGAADGSIALWN
   WD 4  129-167    -YK----LYRCGSVK-DSSLVACAFSPDGGLFVTGSSGGDLTVWD

   WD40 Template    TGE----CLRTLSGH-TSGVTSVSFSPDGKRLVSGSEDGTIKVWD