Input parameters:

  Query = ENSMUSP00000115022 (Len=232)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSMUSP00000115022, Len=232):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 RINRAARCVRWAPNENKFAVGSGSRVISICYFEQENDWWVLGWGWRNLGWGTGAYVMQDQNVPEHGRCNVETPGHLSSEP 80  
WD40-rpts      (_____________WD 1____________)          (_________________WD 2________________)

Query       81 HWWVCKHIKKPIRSTVLSLDWHPNNVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVC 160 
WD40-rpts      (__________________WD 3_________________)                     (_________________

Query      161 FSASGSRVAWVSHDSTVCLVDADKKMAVATLASETLPLLAVTFITENSLVAAGHDCFPVLFTYDNAAVTLSF 232 
WD40-rpts      WD 4________________)   (________________WD 5________________)          

5 WD40-repeats found in QUERY=ENSMUSP00000115022 (Len=232):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     1-31       6.01  362.78  0.00080       12.5%     44.32
  WD 2:  Seg  5    42-80       6.83  396.77  0.00028       10.0%     24.16
  WD 3:  Seg  9    81-121      8.27  456.13  4.4e-05       22.5%     50.74
  WD 4:  Seg 13   143-181      8.51  466.02  3.3e-05       32.5%     59.34
  WD 5:  Seg 17   185-222      7.00  403.87  0.00022       17.5%     50.65

Multiple sequence alignment of 5 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    1-31     R----------INRAARCVRWAPNENKFAVGSGSRVISICY
   WD 2   42-80     GWG-WRNLGWGTGAYVMQDQNVPEHGRCNVETPGHLSSEP-
   WD 3   81-121    HWWVCKHIKKPIRSTVLSLDWHPNNVLLAAGSCDFKCRIFS
   WD 4  143-181    -GE-LMFESSSSCGWVHGVCFSASGSRVAWVSHDSTVCLVD
   WD 5  185-222    -KM-AVATLASETLPLLAVTFITENSLVAAGH-DCFPVLFT

   WD40 Template    TGE-CLRTLSGHTSGVTSVSFSPDGKRLVSGSEDGTIKVWD