Input parameters:

  Query = ENSMUSP00000115786 (Len=202)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSMUSP00000115786, Len=202):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MTFVPVIPEAYSHVLAEFESLDPLLTALRLDSSRLRCTSIAVSRKWLALGSTGGGLNLIQKDGWKQRLFLSHREGAISQI 80  
WD40-rpts                   (_____________________WD 1____________________)   (________________

Query       81 ACCSHDDDYVAVATSQGLVVVWELNQERRGKPERIHVSSEHKGRKVTALCWDTAVLRVFVGDHVGKVSAIKLNTLKQAKA 160 
WD40-rpts      _WD 2_________________) (_____________________WD 3____________________)       (_

Query      161 AAAFVMFPVQTVLTVDSCVVQLDYLDGRLLVSSLTRSFLCDT 202 
WD40-rpts      ______________WD 4______________)         

4 WD40-repeats found in QUERY=ENSMUSP00000115786 (Len=202):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1    14-60       5.62  347.01  0.00131       20.0%     43.09
  WD 2:  Seg  5    64-103      6.26  373.36  0.00058       17.5%     56.26
  WD 3:  Seg  9   105-151      5.66  348.53  0.00125       15.0%     43.26
  WD 4:  Seg 13   159-193      3.44  256.56  0.02151       10.0%     29.70

Multiple sequence alignment of 4 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   14-60     VLAEFE-------SLDPLLTALRLDSSRLRCTSI-AVSRKWLALGSTGGGLNLIQ
   WD 2   64-103    -WKQRL-------FL-------SHREGAISQIACCSHDDDYVAVATSQGLVVVWE
   WD 3  105-151    NQERRGKPERIHVSS-------EHKGRKVTALCW-DTAVLRVFVGDHVGKVSAIK
   WD 4  159-193    -----K-------AA-------AAFVMFPVQTVL-TVDSCVVQLDYLDGRLLVSS

   WD40 Template    TGECLR-------TL-------SGHTSGVTSVSF-SPDGKRLVSGSEDGTIKVWD