Input parameters:

  Query = ENSMUSP00000118406 (Len=209)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSMUSP00000118406, Len=209):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MRLKISLSKEPKHQELVSCVGWTTAEELYSCSDDHQIVKWNLLTSETSLIVKLPDDIYPIDLHWFPKSLGIKKQTQAESF 80  
WD40-rpts        (_________________WD 1________________)             (_________________WD 2____

Query       81 VLTSSDGKFHLISKLGRVEKSVEAHCGAVLAGRWNYEGTALVTVGEDGQVKIWSKTGMLRSTLAQQGTPVYSVAWGPDSE 160 
WD40-rpts      ____________)  (_________________WD 3________________)  (________________WD 4___

Query      161 KVLYTAGKQLIIKPLQPNAKVLQWKAHDGIILKVDWNSVNDLILSAGED 209 
WD40-rpts      _____________)   (_____________WD 5_____________)

5 WD40-repeats found in QUERY=ENSMUSP00000118406 (Len=209):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     3-41       7.74  434.39  8.7e-05       25.0%     46.45
  WD 2:  Seg  5    55-93       6.58  386.48  0.00038       10.0%     47.97
  WD 3:  Seg  9    96-134     10.02  528.64  4.7e-06       27.5%     54.48
  WD 4:  Seg 13   137-174      6.87  398.65  0.00026       20.0%     54.45
  WD 5:  Seg 16   178-209      4.38  295.57  0.00645       12.5%     41.20

Multiple sequence alignment of 5 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    3-41     LKISLSKEPKHQELVSCVGWTTAEE-LYSCSDDHQIVKWN
   WD 2   55-93     -DDIYPIDLHWFPKSLGIKKQTQAESFVLTSSDGKFHLIS
   WD 3   96-134    -GRVEKSVEAHCGAVLAGRWNYEGTALVTVGEDGQVKIWS
   WD 4  137-174    -GMLRSTLAQQGTPVYSVAWGPDSEKVLYTAGK-QLIIKP
   WD 5  178-209    -NAKVLQWKAHDGIILKVDWNSVNDLILSAGED-------

   WD40 Template    TGECLRTLSGHTSGVTSVSFSPDGKRLVSGSEDGTIKVWD