Input parameters:

  Query = ENSMUSP00000121438 (Len=241)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSMUSP00000121438, Len=241):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 XVKDSSLVACAFSPDGGLFVTGSSGGDLTVWDDRMRCLHSEKAHDLGITCCSFSSQPLSGGEGLQSYQLASCGQDCEIKL 80  
WD40-rpts      (_____________WD 1_____________)  (_____________________WD 2____________________

Query       81 WAVTITRVLGFELKYKSTLSGHCAPVLACAFSHDGKMLASGSVDKSVIIHGIGPQSVLHTLTQHTRYVTTCAFAPNTLLL 160 
WD40-rpts      _)          (_________________WD 3________________)   (_________________WD 4____

Query      161 ATGSMDKTVNIWQFDLETPCQAGSMNDPLKHFTEEWSEEDVSVWLRAQGLEDLVGIFRANNIDGKELLHLTKESLAGDLK 240 
WD40-rpts      ____________)     (_________________WD 5_________________)                      

Query      241 I 241 
WD40-rpts       

5 WD40-repeats found in QUERY=ENSMUSP00000121438 (Len=241):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     1-32       7.66  430.91  9.7e-05       32.5%     45.31
  WD 2:  Seg  4    35-82       7.90  440.84  7.1e-05       35.0%     54.42
  WD 3:  Seg  8    93-131      9.65  513.17  7.5e-06       40.0%     44.19
  WD 4:  Seg 11   135-173     10.23  537.27  3.6e-06       37.5%     50.47
  WD 5:  Seg 15   179-218      5.56  344.18  0.00143        7.5%     44.42

Multiple sequence alignment of 5 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    1-32     -------XVKDSSLVACAFSPD---------GG-LFVTGSSGGDLTVWD
   WD 2   35-82     MRCLHSEKAHDLGITCCSFSSQPLSGGEGLQSY-QLASCGQDCEIKLWA
   WD 3   93-131    LKYKSTLSGHCAPVLACAFSHD---------GK-MLASGSVDKSVIIHG
   WD 4  135-173    QSVLHTLTQHTRYVTTCAFAPN---------TL-LLATGSMDKTVNIWQ
   WD 5  179-218    PCQAGSMNDPLKHFTEEWSEED---------VSVWLRAQGLEDLVGIFR

   WD40 Template    GECLRTLSGHTSGVTSVSFSPD---------GK-RLVSGSEDGTIKVWD