Input parameters:

  Query = gi_186681167_ref_YP_001864363.1_ (Len=300)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (gi_186681167_ref_YP_001864363.1_, Len=300):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MTNDKIQVIGIDVGGTAIKLGRFTADGICLQSLTMAAPQPTTPEAVLAVLVDAIAQIDPNNETFAIGVGTPGPSDAAGRI 80  
WD40-rpts                                                                                      

Query       81 AKIAINLPGWIDVPLADWLEAKTGKPTAIANDANCALLGEAWLGAGRQFQNLILLTLGTGVGGAIILDGKLFVGHLGAAG 160 
WD40-rpts                                                                         (____________

Query      161 ELGLISLNPDGPICNSGNQGSLEQHASATAIRRRTLKEPVELGFLAQQGDPGALTFWQEYGRNLGIGLTSLIYVLTPQAI 240 
WD40-rpts      __________________________________WD 1__________________________________________

Query      241 VIGGGISGSFEFFLPAAKAEIEKRVQPLSRDGLQILPAELGNFAGMVGAARLALQHYSRF 300 
WD40-rpts      ___)                                                        

1 WD40-repeats found in QUERY=gi_186681167_ref_YP_001864363.1_ (Len=300):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  9   148-244      3.08  241.88  0.03371       25.0%     16.07

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  148-244    DGKLFVGHLGAAGELGLISLNPDGPICNSGNQGSLEQHASATAIRRRTLKEPVELGFLAQQGDPGALTFWQEYGRNLGIGLTSLIYVLTPQAIVIGG

   WD40 Template    TGECLRTLSGHTSGVTSVSFSPDGKRLVSGSED----------------------------GT-----------------------------IKVWD