Input parameters:

  Query = gi_186681263_ref_YP_001864459.1_ (Len=436)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (gi_186681263_ref_YP_001864459.1_, Len=436):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MTQAIKTQTQTQTSTAYFQALKCKECGAEYELKASNVCELCFGPLEVKYDYSALRLTVTRETIQAGPNSIWRYRPFLPVA 80  
WD40-rpts                                                                                      

Query       81 TDNVIDVGTGMTPLVRSHRLARRLGLNKLYIKNDAVNMPTLSFKDRVVSVALSRARELGFTTVSCASTGNLANSTAAIAA 160 
WD40-rpts                                                                                      

Query      161 HAGLDCCVFIPADLEAGKIIGSLIYSPTLMAVKGNYDQVNRLCSEVANTHGWGFVNINLRPYYSEGSKTLGFEVAEQLGW 240 
WD40-rpts                              (__________________________________________WD 1_________

Query      241 ELPDHVVAPLASGSLFTKIYKGFQEFIEVGLVEDKKVRFSGAQAEGCSPIAQAFKEGRDFIKPVKPNTIAKSLAIGNPAD 320 
WD40-rpts      _________________________________)                                              

Query      321 GIYAVELAQKTGGNIESVNDAEIIDGIKLLAETEGIFTETAGGTTVAVLKKLVEAGKIDPDETTVIYITGNGLKTQEAIQ 400 
WD40-rpts                                                                                      

Query      401 GYVGEPLTIDAKLDSFERALERSRTLDRLEWQQVLV 436 
WD40-rpts                                          

1 WD40-repeats found in QUERY=gi_186681263_ref_YP_001864459.1_ (Len=436):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  6   185-274      3.24  248.40  0.02762       22.5%     12.99

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  185-274    YSPTLMAVKGNYDQVNRLCSEVANTHGWGFVNINLRPYYSEGSKTLGFEVAEQLGWELPDHVVAPLASGSLFTKIYKGFQEFIEVGLVED

   WD40 Template    TGECLRTLSGH---------------TSGVTSVSFSP---DG-----------------KRLVSGSEDG---------------TIKVWD