Input parameters:

  Query = gi_186681701_ref_YP_001864897.1_ (Len=560)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (gi_186681701_ref_YP_001864897.1_, Len=560):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MAKIIAFDEESRRALERGVNALADAVKITLGPKGRNVLLEKKFGAPQIVNDGITVAKEIELEDPLENTGARLIQEVASKT 80  
WD40-rpts                                                                                      

Query       81 KDVAGDGTTTATVLAQALIREGLKNVAAGSNPVSLRRGIDKTIEALVLEIAKIAKPVEGSAIAQVATVSAGNDEEVGQML 160 
WD40-rpts                                                                                      

Query      161 AQAMEKVTKDGVITVEESKSLTTELEVVEGMQIDRGYISPYFVTNNERQIVEFENARILVTDKKISSIQDLVPILEKVAR 240 
WD40-rpts                                                                                      

Query      241 SGQPLLIIAEDVEGDALATLVVNKARGVLAVAAIKAPGFGDRRKALLEDIAILTDGQLISEEIGLSLDTAALEALGTARK 320 
WD40-rpts                                                                    (_________________

Query      321 ITIDKESTTIVAGSVTKPEVQKRIGQIRRQLEETDSEYDQEKLQERIAKLAGGVAVIKVGAATETELKDRKLRIEDALNA 400 
WD40-rpts      __________________WD 1___________________________________)                      

Query      401 TKAAVEEGIVPGGGTTLIHLAKAVEAIKKTLQNDEERIGADIVERALEAPLRQIADNAGAEGSVIVSKVRDSEFNIGYNA 480 
WD40-rpts                                                                                      

Query      481 ATGEFEDLIAAGIIDPAKVVRSALQNAGSIAGLVLTTEAIVVEKPEKKSAAAAPDMGGMGGMGGMGGMGGMGGMGGMGMF 560 
WD40-rpts                                                                                      

1 WD40-repeats found in QUERY=gi_186681701_ref_YP_001864897.1_ (Len=560):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg 11   303-378      2.78  229.59  0.04899       22.5%     26.31

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  303-378    IGLSLDTAALEALGTARKITIDKESTTIVAGSVTKPEVQKRIGQIRRQLEETDSEYDQEKLQERIAKLAGGVAVIK

   WD40 Template    TGECLRTLSGHTSG-VTSVSFSPDGKRLVSGSED-----------------------------------GTIKVWD