Input parameters:

  Query = gi_186681895_ref_YP_001865091.1_ (Len=760)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (gi_186681895_ref_YP_001865091.1_, Len=760):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MDTLTLKLRGMSCAGCANNIEKAIRSVSGVIDCNVNFGAEQAAIRYDRSLASLEKIQTAIAAAGYSSDSLQSELLSEEDD 80  
WD40-rpts                                                                                      

Query       81 TEIASRQALQRELFLKVIVGGVISIFLFLGSLPMMTGLNFPLIPSFLQNPWVQLALTTPVIFWCGGSFYRNGWKSLKRHT 160 
WD40-rpts                                                                                      

Query      161 ATMDTLIALGTSAAYIYSLFVTVFPNFFIVQGLIPHVYYEVAAIVITLILLGRLLENRARGQTSEAIRKLIGLQARDARV 240 
WD40-rpts                                                                                      

Query      241 IRDGREIDVPIAEVRINDVILVRPGEKIPVDGEVIAGDSTVDEAMVTGESLPVKKQPGDEVIGATINGAGAFQFRVTRVG 320 
WD40-rpts                                                                                      

Query      321 NDTFLAQIVKLVQQAQGSKAPIQRLADRVTGWFVPAVIAVAIATFVIWFNFTGNLTLATMTTVGVLIIACPCALGLATPT 400 
WD40-rpts                                                                                      

Query      401 SVMVGTGKGAENGILIKGADSLELAHKIQTIVLDKTGTLTQGKPTVTDFVTVNGTANGNEIKLLQLAATVERNSEHPLAE 480 
WD40-rpts                                                                                      

Query      481 AVVKYAQSQEVSLIEVKNFQANAGSGVQAVVSNQLVQIGTQRWLTELGINTMTLQQYKDTWETAGKTVILIAVDGELQGI 560 
WD40-rpts                                                                                      

Query      561 MGIADALKPSSAAVVKALQKLGLEVVMLTGDNRKTADAIAAEVGIERIFAEVRPDQKAAIIQSLQGEIKKSPNSKSKIVA 640 
WD40-rpts                          (_______________________________________________WD 1________

Query      641 MVGDGINDAPALAQADVGIAIGTGTDVAIAASDITLISGDLQGIVTAIQLSHATINNIKQNLFFAFIYNVIGIPIAAGIL 720 
WD40-rpts      _______________________________________)                                        

Query      721 FPIFGWLLNPIIAGAAMALSSLSVVSNALRLRKFQPKATS 760 
WD40-rpts                                              

1 WD40-repeats found in QUERY=gi_186681895_ref_YP_001865091.1_ (Len=760):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg 17   581-680      3.42  256.04  0.02185       27.5%     21.76

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  581-680    LGLEVVMLTGDNRKTADAIAAEVGIERIFAEVRPDQKAAIIQSLQGEIKKSPNSKSKIVAMVGDGINDAPALAQADVGIAIGTGTDVAIAASDITLISGD

   WD40 Template    TGECLRTLSGHT-----------------------------------------SGVTSVSFSPDGKR-----------LVSGS--------EDGTIKVWD