Input parameters:

  Query = gi_186682542_ref_YP_001865738.1_ (Len=324)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (gi_186682542_ref_YP_001865738.1_, Len=324):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MVEYYTQRASAGLIITEGTHPSPMGRGYTTCPGLHNQEQVGGWRKVTDAVHAAGGRIFVQLMHAGRVSHSSLLPNHARPI 80  
WD40-rpts                                                          (_________________WD 1______

Query       81 APSAVPVVSEEVHVWDGKVPFEIPRPLELSEIPEIVEEFRRAAELSIEAGFDGVELHAATGYLPNQFQVSGSNQRTDAYG 160 
WD40-rpts      ___________)                                                                    

Query      161 GTLENRTRFTLEVVNALCKVRGAEQIGVKIAPGFTVNDTFDDNPAETYTYVAKALSPLGLAYLHVGYNQGYARGTAPNFN 240 
WD40-rpts                                                                                      

Query      241 PIDLLRTVYQGTLLAVGGFDRQQGDEAITSRRADAIVFGRPFISNPDLVERLRLNAPLSKGDIRTFYGGSEHGYTDYPTL 320 
WD40-rpts                                                                                      

Query      321 PQLH 324 
WD40-rpts          

1 WD40-repeats found in QUERY=gi_186682542_ref_YP_001865738.1_ (Len=324):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  2    53-92       3.16  245.38  0.03029       17.5%      0.91

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   53-92     AGGRIFVQLMHAGRVSHSSLLPNHARPIAPSAVPVVSEEV

   WD40 Template    TGECLRTLSGHTSGVTSVSFSPDGKRLVSGSEDGTIKVWD