Input parameters:

  Query = EG_MAL13P1.264 (Len=464)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (EG_MAL13P1.264, Len=464):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MSFFPPVELIRKKNKLIKVNNDYSFEFNVLKSGKEKASIKSISICSIYIAIAYNNTIIFNNLKGEQLDKKYQCRENVSKL 80  
WD40-rpts                          (__________________WD 1_________________)  (________________

Query       81 KFRDEKMLGVGLENGEIELIGMFCYDRIKTFKGHKSSINDLIFSNNFQSLYTCSRDFTIKIWNIWQGICEHTIDYHMDNI 160 
WD40-rpts      WD 2________________)   (_________________WD 3________________)   (_____________

Query      161 TSLILYNNNDTDYLISSSYDGFIYFYDIIKKKHTNKLEIQEPIECIYIFEKEYLILSVRNVIKFYSITNFKYIKDIVIST 240 
WD40-rpts      _____WD 4_________________)   (_______________WD 5_______________)   (__________

Query      241 KTIFYINSFKKYIVASSLDMSIYFIDPFYKNTEEIKIVCIVNYSNHPKSFDIYNDIIALGEIDGTWSIELYHKKEKLHKN 320 
WD40-rpts      ______WD 6_______________)     (_________________WD 7________________)  (_______

Query      321 KKKSKFNKIYYEDEKFVYTDNNVNLMIKKFKYNDALMYIIKNDPQSTMSLLDYFSKHKVLTAACRTFCVDRAISILIFLR 400 
WD40-rpts      __________WD 8________________)        (________________WD 9________________)   

Query      401 KKFVVDVLMFEFFFSFFSANKWILTTKDKRILEELQLLKKGFLNVKRYMKYYNHLKDIADCLRN 464 
WD40-rpts                                                                      

9 WD40-repeats found in QUERY=EG_MAL13P1.264 (Len=464):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  3    21-61       3.98  278.92  0.01080       10.0%     36.47
  WD 2:  Seg  7    64-101      7.29  415.73  0.00016       30.0%     54.57
  WD 3:  Seg 11   105-143      9.84  521.01  5.9e-06       32.5%     55.27
  WD 4:  Seg 15   147-187      8.38  461.02  3.8e-05       35.0%     57.51
  WD 5:  Seg 19   191-226      4.50  300.43  0.00555       10.0%     50.45
  WD 6:  Seg 23   230-266      6.48  382.36  0.00044       17.5%     51.16
  WD 7:  Seg 27   272-310      6.58  386.39  0.00039       17.5%     46.76
  WD 8:  Seg 31   313-351      6.56  385.64  0.00040        7.5%     41.87
  WD 9:  Seg 35   360-397      4.63  305.86  0.00469        7.5%     26.01

Multiple sequence alignment of 9 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   21-61     NDYSFEFNVLKSGKEKASIKSISI--CS---I-----YIAIAYNNTIIFNN
   WD 2   64-101    -GEQLD----KKYQCRENVSKLKF--R-DEKM-----LGVGLENGEIELIG
   WD 3  105-143    -YDRIK----TFKGHKSSINDLIF--SNNFQS-----LYTCSRDFTIKIWN
   WD 4  147-187    -GICEH----TIDYHMDNITSLILYNNNDTDY-----LISSSYDGFIYFYD
   WD 5  191-226    -KKHTN----KLEIQ-EPIECIYI--FEKEYL-----ILSV--RNVIKFYS
   WD 6  230-266    -FKYIK----DIVISTKTIFY--I--NSFKKY-----IVASSLDMSIYFID
   WD 7  272-310    -TEEIK----IVCIVNYSNHPKSF--DIYNDI-----IALGEIDGTWSIEL
   WD 8  313-351    -KKEKL----HKNKKKSKFNKIYY--EDEKFV-----YTDNNVNLMIKKFK
   WD 9  360-397    -----------IKNDPQSTMSLLD--YFSKHKVLTAACRTFCVDRAISILI

   WD40 Template    TGECLR----TLSGHTSGVTSVSF--SPDGKR-----LVSGSEDGTIKVWD