WDRR: WD40 Repeat Recognition
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| Pre-calculated Results - Accession: EG_MAL13P1.380 [Plasmodium falciparum] [Download result as txt] [Query sequence in FASTA]
Input parameters:
Query = EG_MAL13P1.380 (Len=7594) Tmplt = WD40-str (Len=40) Method = bdp Gap-open = 50 Gap-extend = 3 Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3Query sequence (EG_MAL13P1.380, Len=7594): (BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED) 10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 MFQKFFSDILYKILGNFIYGLNDEELALSDLLSGKLELTNIHLKQSVIDLIDIPCRLNFGCVGYFKINLPLLYFMKNPIN 80
WD40-rpts
Query 81 IYMEDVIIVLSTIPSKYFDDKLYKEKYIENKKNLLLSSEYRAIVCSAEGGVIWQMILSLINNINITIKNVHIRIEDFTSN 160
WD40-rpts
Query 161 PSNCFSLGIKIEELFLNMPKEGLPFNRDGYYTKKKELVSNTMINMITVKRLAFYMDSLDMKKITNKKYFNKFRDIFINYC 240
WD40-rpts
Query 241 NMDERNYPEINMKSNYTNDSKNIKKVHMNCEIQNMNNFKRNRKNKKNKSKHNNHKNNNKINNNTKKLFKKKKNKRSNQQN 320
WD40-rpts
Query 321 LESFLNIIKSIKKSSYYVCKNDNNINKMDKINQRILLLNDTISAKKKKNKIINNNIKMKNTHNEQQNKDNNCSISISNFY 400
WD40-rpts
Query 401 KFNPFSSKKEEKVDMPILIDDIKLDNDISWIACITLFADSLENSFIKEKKEELLKKQRNKKKNNTNDKNAQPEKDDDGFY 480
WD40-rpts
Query 481 QTCKTIDENKNIKDHNHSFNNKLNKNNEQIKSNNYEKEKMGSHTFIDKDNNNNNNKNNPSFNSDISNTRKLTSNYYLNKA 560
WD40-rpts
Query 561 VSFLSMKSFTKILQKKKLSKNMHRHKNKENDFSSNDQNISDDYFTTKEKMSDIDFNSEDIYSSKYKKKRKNEMKKKDFNF 640
WD40-rpts
Query 641 KKNGYSKYEKKDEEKYYDVKDKNQSDEHISTFHHSKNTDKNYFSFSDNDKNNKKYMSQNKKKGKKKTYIEKQEDYGKNYK 720
WD40-rpts
Query 721 YKTRNEYDKTNNESYKNQNFNDSAHNLISNYEKCIQLNDKRKEIKMEQYRIMNYIKKNEIKEKIRNKKRKKIHSVYLMYE 800
WD40-rpts
Query 801 KTYKINKSKLNYFYIFLRLTKNIKHEYIINPNYFEGYVEIYLSLIPTDHGERPFSRCFSSWGIQRRSQNEFDECLPKISV 880
WD40-rpts
Query 881 FVTLKNMKIIFSDKQMSNLIKWLNLNFVTYSTWKAGILSQFEKPKATPNEEMCYINKWVLKLLDTHSSKEEKEDAEKYCE 960
WD40-rpts
Query 961 LFENTHSIHIINLLRTKAFSKLQELRKDMETKMKPNNNNNNNNNNTYDMVNDTNQYNEIGKKENEVKQVANESINVLKNL 1040
WD40-rpts
Query 1041 MKNEKAFNKIKTSFRDKNFTIDFCFDICIINSTILLTIETFNKINTRKVNFVKTYALLLQCIHYHNQISNTQEFKNSMDI 1120
WD40-rpts
Query 1121 ELYPLTLLLIINNLDNKYIKPEINVLYILTKSDKKDKYKYKDKKFLFNMENFDILKRYKYIRNTYLYRNDNQKNSNEDRQ 1200
WD40-rpts
Query 1201 KIEKEQELYNHENENENNHNKQRDTLKLHNLKQKFKYLMEENFFFSKRQNNMYCNELCDITSLSDPSIYLRYDSQSYTIL 1280
WD40-rpts
Query 1281 EKPDCHLFLHNCAYSIFNINGEIANSFVNDYFHFVDNRSVLFKRKTNNFSFKKKEYFLELGAKYCNDIMDNYTKHTSFFI 1360
WD40-rpts
Query 1361 DIELEKMLSFIITKSGQKAEIQGYSLNLNPVKVVSQLSKRSESYNIDNSKKNIYDSFFVQFEGINIKRILNWHEAAKHYK 1440
WD40-rpts
Query 1441 TYIDDNFIKPFHVLFHPINKDIYTNRNQTPDKFFFNLNRKKNIPQLNENGNSNSNGNSNGNSNGNSNGNSNGNSNGNSNK 1520
WD40-rpts
Query 1521 NSNKNSNENSNENSNKDNKISYQNDNIYNNNSNNMHKRSSSYKNLNNETINYNNDEKKKSEIYNLIYNTRKSLSSYTHSE 1600
WD40-rpts
Query 1601 SVSKNHIYDNNKNIYIKKKKMNNKKKKSKNKKNKKTKLNNIRRSSSCPPPKNINIYFDSSNKSDILYNDRKTTLYSLNYM 1680
WD40-rpts
Query 1681 YEQNRQSTITYNNCDIGCKACDVSGNCCNISNICCCNFTRDYYNSYLLKSWGNKCEHKKKNITHSNNDLYKKYEKQWNDI 1760
WD40-rpts
Query 1761 TNCTIYDNNDIDYNKKKNNNDNSNYVLSMSGNTFFTIHLCHIKFNPTHPMFIVKLNEEKLCINICDYDMEFFFLIFSQIF 1840
WD40-rpts
Query 1841 DHYSQQELACKKKNIIFLKNKINSISHLNDKYYYNTYHKNEVKKLGISKDITNELYTIAKHPSHMYDGEFINLKKKNKKL 1920
WD40-rpts
Query 1921 KKQKRPKKQKIKNKKYKHKNDDLINNHEIKSINGKRKHDELEQNEVNFSILKKTNKRNYSLQGQRNKEDIKKYNMINTQD 2000
WD40-rpts
Query 2001 TNELPIDIKEKEYKETRKEMKTKSKTFCNKSNSYRKNTFVNYSSDNNTRTTKELSLFKLKNDIFKYRQSAEKKYEDKNIN 2080
WD40-rpts
Query 2081 VDQYINKKDTKTDILLYNKKDDVSLKSKKLLFPNLSIDRIKNSIKFKNSLDSTYVSNGSQYSDTIYVHKTEYKNGNKNKN 2160
WD40-rpts
Query 2161 EHVNEHINKNEHKRKKNKQKKKKNKLKNKKKHINKTKHNTNILYQKYQMFDETCNSNNMQYGYHNDVLIPHDNYSFSSDD 2240
WD40-rpts
Query 2241 DSWVDLLENYDSDESLDDYEKRNVKNMLIDIDNIKKRFSNNNFIITCSFSFSIKNVFIRLWKRKSPMKNQNFKTTEWENL 2320
WD40-rpts
Query 2321 NSVQLLDNISNIEYNKDNRNDNIYKSKTKNIKTEYDEYKLLDKNSYYNLTSVVKENEINRFHKKERHNIIEDDDNISLCN 2400
WD40-rpts
Query 2401 KNFIILNEHLQKNMFNNIQYGMPLYTIILSDIFFVAKVEKNNCAHVLYSMNNIDIKDETNITLLSMNSIYHSDLKSMEKK 2480
WD40-rpts
Query 2481 TFPNSYKYKNNIPDNIYINKRKKNSSMNSKGDMEKIETEDTFFSFDYSINNLDLPDLEKTHLVLMYFGSLFKNNHTFKFI 2560
WD40-rpts
Query 2561 LNKTKLKIFWEVVDEFLSWIINTSDLFPQLNTIQYDIIKKLDDSENKHLDYLHKIQKINYDILNVKKLSSSFSTNVGFKI 2640
WD40-rpts
Query 2641 PFHILINRYNINYEIYSGRKNLGNYNENMLDFYNVDVEPIEEYYIITNEQTCRSYNNVCFMNNPEDMNNMIKEILFNENY 2720
WD40-rpts
Query 2721 FFNYTFNKLNKNKNISDILYKGNNTNQNVVNFYNDISNDNVIINNNNNNNNIQNCNLNNNNIDNYNLENQKSYIKIESSF 2800
WD40-rpts
Query 2801 LKDNNVTIKSNEELLSNEYLFEPSTNNAKIINENNISIDNLYEENECSDCFHMMNLNYTSYTKELCKTKNYPYIHVDIEI 2880
WD40-rpts
Query 2881 NYFEFWISLDPIRIPQKRKRHCGMYMNKKLYYHERRKERQKKNRKRDKRKHTIINNNRFNKEKSFCTYYSTSKVLDEEKL 2960
WD40-rpts
Query 2961 SNTTKLCKKIKYYKNLNTDKPYVLATKGCLKSVLFILLYNRQEINNEVDNTYEFINDDSSYDPLYDYLLNNEKDKIKGNN 3040
WD40-rpts
Query 3041 YYISKMSSYNSENYIKSQIKNKERQSNHNLKNKLMEVLQYSNLNNIINIEEFLNSKFICFLNNMSSYLPCVVNMNIFLSQ 3120
WD40-rpts
Query 3121 ITSAIAKPVTKNSFLKAYIDWNNVPYNNILLQPFRANFQFELKLPNPEILLERLLGINKITSLKVMKNNNIIYKNEAEGI 3200
WD40-rpts
Query 3201 DINCSFEPIVLNVDSNTLTLLNQLYNIIFDFSNYILKLCAPKNKDANELLMINSFNDNLYDNFTEYMMSDDFYFNLNESS 3280
WD40-rpts
Query 3281 LLSTSLSRSTSLSLSSFELNNKYKLKNIQSNNELLYTSKNTHKFQMNNEDDDNMLVNFKLNYNNHNPVNKINNIDENIIP 3360
WD40-rpts
Query 3361 IDAEAPMVEHIEQSELQVKKNNQEKVYSETEKNKEGFDGVSIHDEKKKLNVSDRNIPTEDNTKRSLNKPLILHHKYNTFM 3440
WD40-rpts
Query 3441 NNTNEPILNTDCNMKANNQTYLLESDLSNILLFNFVENVKVSVHLNFDVILLQIWDSNTAYNRCSFNFVIEYINIRFNTT 3520
WD40-rpts
Query 3521 NIYEMNLQNDKLELYNIKENNTYDEISKNKKDPNDNINYRNKNENFDQSNRTLLQRVSETKNIQDSNIDKSHLIHSGITN 3600
WD40-rpts
Query 3601 DACSNMNSDINKKKYTYGKSAVNFLTNENQLYVNNIKKKYRSVAGDININMNKETNDNMLTKKKELDYFESIDNNMMNCN 3680
WD40-rpts
Query 3681 IEKDKILDLSRKEKIDIYNSTKENTKIVNSNLENNINNNSNYSNNKNLFSKLFNRNNFVKNLKQFKEEIMKIVKKLFCRK 3760
WD40-rpts
Query 3761 KLDEILEIIEEKGNELETENEMLGRRKKHEHFKNIFLKNELMSNDLKKNNDKKKSKDIECTIEFLIYCENFNKKENSYQT 3840
WD40-rpts
Query 3841 FIEPICTEIIIMKKELNTPIHIYYYFSWININWNFNFLDNILSLCCSIIFSMITQRTRLLLGRHMNDIDKRKNRKKIIQG 3920
WD40-rpts
Query 3921 HTKNEKMEDGSLKNPHVNTNTTHPTEYDDNNTERKNLSEIDDTQTSMYLPNYYGALNDEQYKDLALITNENILFRYNKFD 4000
WD40-rpts
Query 4001 VLHTVNKSLDTYIFGELILEKLLRNYQYSCQYPGDYLSKYENEFNVDKVNSPSQQLLHIKLFNYIKKKKRLEMKNICKLN 4080
WD40-rpts
Query 4081 NLLGQPIAVCTIIEEKKNIQYKNIKMTKSQMKYENNKYNSKEIYNNENTIYDYNKRNILLNSINAITNSNRKKYNSFNPF 4160
WD40-rpts
Query 4161 EDYKCLQISDMNHKKLGKCQNHSEEFGNSDNSSLNDTKDILKYQWKIISNNESLDLPIHENGKVKFFLIRFRLLNYIYDI 4240
WD40-rpts
Query 4241 PSNILNTEKENEDVIRLIIPERRLPPNINEQVEQELYNQEILEMEQENDTMDSNSHTIYPTNYLFKKYVTGKNDTVWCPS 4320
WD40-rpts
Query 4321 NIPQPRNHLFIYFRTSSRISHEEKQEYDFFLSSVVAIKNNTDFPLYIFKSVPGNVNKSSIFKEYFHKYNTKPSPPPTYTL 4400
WD40-rpts
Query 4401 KVDKKIEYLIENQNKDKNDFSNGNNENEQDNNIEKRNNIFYSTDQIIINNNNNNNNYNNNYNNNYNYCFDPNKDHNSYST 4480
WD40-rpts
Query 4481 RQHNEKLSKQKTKQNKNKNHKKNNNSNDIYEKKDNKQGNSKNYSNNHQNNNKDQEEGKKKNINSSNESYLHNRKMIKNIF 4560
WD40-rpts
Query 4561 PLMKLSSMEHYISGDIKFSSLAPLKYKRKKKKKKKKNKLKYELQKEYIKKKIKELYLKSIWKKTQRKKINKYKNDINKIN 4640
WD40-rpts
Query 4641 QKIKEYSYEEHAPYRNIMSINDPFFNFIKQNSSSSQKLSNNSLNISDVTNITLSSLSSTFFSIHSSQSNNSTYEDSLYDY 4720
WD40-rpts
Query 4721 DKDNCLEQALLDEYFKKQNDDDVLLDIIEISNNSNKLIPIPLYWLVAENSFIWLSIQNEEIYKNKDLYNFLNEEMNADYL 4800
WD40-rpts
Query 4801 CTKKTLDNILNYQSPFVADTLKLFKPYLIKLKNHLLKEDNLFSKNKKDENETFMTNYNTNYMNLKEVYFTSSVVSVYNRN 4880
WD40-rpts
Query 4881 YVLNRKDAHNFFQISIEHVLMINNGLPKTMYINCEVLKSKLKKKNTIKKNISHYKSFPSIEKSKQYKDSENREDSYVIES 4960
WD40-rpts
Query 4961 SCNKTNEEYSSYYNDDKNDNDSKYYDDGKHDDDSKYDDNSKYDDNSKYDNYNNNHHNNNNNNNDNNNFMYNEGSDMFSQN 5040
WD40-rpts
Query 5041 SHEVKRDKGVDTFYDIHDELTLEEKQNMKKKKITLVVDKFNQPLNEDTNKDHIYIVDKYSDNNRTNNKRVFIKEANIDRN 5120
WD40-rpts
Query 5121 VFIYKNTKKNENDYIDDNEKSKNYMDDNNFIVNIKKEENKDIYEIKINPGQSIKLPFLLHNITISFDGYHSRNIFINYPH 5200
WD40-rpts
Query 5201 KKGREKIMLERQISPDISSFFTFDYEESNENNDEHSSNKSTMNYVNNKNISENTNKNYHHFDSSLSLTDKTKNQLTYKNR 5280
WD40-rpts
Query 5281 NHQKNDDYPLSKYSDYHKRKTTKYEEYQKQLSIWAIFNDFYETGKNRYQDISLEKIYHGTYSISCTFFASACIINRLSYP 5360
WD40-rpts
Query 5361 IKLKRLNNENVVVIEPYIRTLLPCEFSMRRNKVVISHETLKDIKNWKNYPLKKYMIKRTKLIKTRNFIKKDNQIIVHSTK 5440
WD40-rpts
Query 5441 CDDGKQIKHKWDNKQLIRGDKNVSIKKNKSNEEIILTKQNETTNEINNEKIKSDIIKNDGSYQYDRKEEDHYHVDDNNDD 5520
WD40-rpts
Query 5521 DEIEYNKKNIPYNKNTLCGYKYKKKRRFRFFFYRNNINKPLESEDFRITDLSVTRLTCSNKNKNIPQLKYSTYMSIAPMP 5600
WD40-rpts
Query 5601 FFRTTVMEILPYIVIINNTKMNIVFQEFIKNYTYFKYNKLQPGDYVEFHPQSKKKVMLKMCGIYQNTFDHLIDDYLQKEL 5680
WD40-rpts
Query 5681 YLENFEKKNEKLIDDIKADKHYDKKNMEKKKKYSTNKESKKKKKNNIANNYIWNISKRITALKDMENVYDSNNSAKYNDN 5760
WD40-rpts
Query 5761 EKNYINNKMKNKNKKNKYKNNKNKKNNNENNENNYSTSSKNSSNSTIENYSEEENSNGPLNSSKHNNIKKHKYMNEYTFL 5840
WD40-rpts
Query 5841 YWSEVLDLNRVSMIYFRHPVISETNFKIEEKKLQKLNSILRKYGKNDDAYINILKELIKKNNQITYKYSCCSMEITTFKG 5920
WD40-rpts
Query 5921 CKFVRFQDIDVVPYYLINLTKYNIKLRQVGIYEHSEILQKIPHKKKTSFNEIFKNYAFNFSFYNPYKDPKLKVTLLSNNK 6000
WD40-rpts
Query 6001 KNDYYNNNSKYKKEKKRTLLKKIPNKLKHNLKHELNYLSFLTKNYITAKEDAKILNDKIFQLKRFSQQIEKLNDEKMNII 6080
WD40-rpts
Query 6081 DLGNNNNITLLKLNYKNSLIYILCTKRTYNGKTIYLFENYDDLISNILNFNTISFNSKCNSKLLKSFSLFRDTIKSKNKY 6160
WD40-rpts
Query 6161 SRKDTYKKKKKHIKYMKTFIHNPNVKYLLNFFKKKSSASSIENKLKKNIKQKKKNKINKVYKNSRTNKRTTHIITELYQK 6240
WD40-rpts
Query 6241 NMFHQEEETKKKNKNIILNMNIFAHLIFKGIGISISNHNLEEILYFSMEYILIIYKQMIDRDLFHINIGWLQIDNHTKNT 6320
WD40-rpts
Query 6321 DYKNVLLPIVDLQKQTNKNNAKEINEEKKYFINESNIALYNSISNNKRDDKFNKINKHNTFLHNRYDTISGHIISGDINS 6400
WD40-rpts
Query 6401 RNLKSNNFKSFNTFSRNINSCNTFSCNINSCNINSCNINSCNINSCNTFSRDTFPYSFRYSNNFSKSSTLNMINSFYSNR 6480
WD40-rpts
Query 6481 NKSYNSFIDNDVLIVTNLNNPLHNSYKVFIPQFFYSEYNSVIYISIIKLKRGNMKNFLELSDVQIKVSPLSLNIDSYFII 6560
WD40-rpts
Query 6561 EMLKIFDEFLKIIEFDLSNYNSLNLEKNIELTDRDFDSLEYKKDIGPIEELIKYHILKDYYLYEQIINFKFNQKVDGIRN 6640
WD40-rpts
Query 6641 QTNNKSHNYKELENYNKIKKNSQDSIFNTNNLYDKSNLDVIEFKEYINMLNEYENIKKNKAISKDIRNKDMLSKMHCTKN 6720
WD40-rpts
Query 6721 NILKKGCTKKSRRTKNIKFYNKNDDDNNNKVNDNKKDYKIDTQINEYIKDNNNNNNNNNNNNTDNKQYINIKKNIININK 6800
WD40-rpts
Query 6801 SCLINNKENMYYDTKKYSDIDKKKKSDDNEDTQVELLDKEKIEYIQRCDKYYKNSLNNRKKILRKIQNINIKNNLISFDK 6880
WD40-rpts
Query 6881 IFISKLEINEMKLIINIKNKSLSYDKKSEIMESNVMNALVVLIMNIPNISDAQLHFDKEVKKNICGSLYELIFNEIMNDY 6960
WD40-rpts (___________________________________
Query 6961 ITPGMNQMVNVLGAIDFIGNPLIIYKHWKKGYETFIHDLKKSLDSCSFPLLFCILFLNTLGKFGKSVLSGILEGINRLCS 7040
WD40-rpts _______________________________WD 1_____________________________________________
Query 7041 SWSTCFERFSRNSDNYSIVTNSNLFQHEILDQPSNCAEGIYYGCQSFINILTISFVNIIYKPFIAIQKSKEFKKKTEKGK 7120
WD40-rpts ____________________)
Query 7121 YKIFFLSLIVLSYGIFSGLSSFFFGFFNSVFSFFTFLFIGTLNQIQTLTMKSVVRPKKMSIIKEYSKFLNYEYPLSFSSH 7200
WD40-rpts
Query 7201 VINEKKRKKELLKKNIVAIILLYTINDNTPNNIKSYLWVSNNELGYCQKDKLLWSLYINCIIKVDILLIEMDNGNFKRYS 7280
WD40-rpts
Query 7281 ISSRKENKYLNNMNNKEKNDANKHTKNSMNNNSNNNNNNNYNINEKLTWNEKNKEQNNQINNNRSTWKIKNLFTPQPFRQ 7360
WD40-rpts
Query 7361 LSDFKPSYYIRILYKSLYKNKKEKRKTNISNLFLYKKSDSNNRLKRIMRKSTYEKYFENEFKEEQKVHRYHTTSKDMPEE 7440
WD40-rpts
Query 7441 PSAKISHINDERKKREKKNNKINIYDNLYPDKTKNIKHHNTKHYKKETKKKHLNKNKNNITSYIDDQNNHMKLWKQNKKH 7520
WD40-rpts
Query 7521 KTKNYKYNNEHNTEYEHVNIKKLFKYNNHKKKKNKYLYISKLVKCENKEVALHAFSLLMSFLMHKSPYYLKTTN 7594
WD40-rpts
 1 WD40-repeats found in QUERY=EG_MAL13P1.380 (Len=7594): (Red - Z-score>4.0) Rpts Segment Boundary Z-score Score P-value Identities SS-score WD 1: Seg181 6925-7061 3.46 257.75 0.02074 20.0% 9.54Multiple sequence alignment of 1 WD40-repeats: (BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED) WD 1 6925-7061 NIPNISDAQLHFDKEVKKNICGSLYELIFNEIMNDYITPGMNQMVNVLGAIDFIGNPLIIYKHWKKGYETFIHDLKKSLDSCSFPLLFCILFLNTLGKFGKSVLSGILEGINRLCSSWSTCFERFSRNSDNYSIVTN WD40 Template TGECLRTLSGHTS---------G-------------VTS-----------VSFSPD----------------------------------------GKR---------------LVS---------GSEDGTIKVWD |
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Copyright © 2012-2015 Ziding Zhang's Lab, China Agricultural University Powered and maintained by Chuan Wang Last modified: 09 Jan 2019 |