Input parameters:

  Query = EG_MAL13P1.54 (Len=527)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (EG_MAL13P1.54, Len=527):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MGDRDALNISAPDVIRLILQYLKENNLIRSFYVLQEESNIKLNAISNVDKLIRDINKGDWKNVLFNITTIDLSDETLMCF 80  
WD40-rpts                                                                                      

Query       81 YEQLICELVEYNEKELAEKIMDECIIFKRMEKKYNDKYNKLIEIMNSKHINKNILYDGLTKDEKRNHLCNMITNEITTCA 160 
WD40-rpts                                                                                      

Query      161 PSRLLALIGMALKWQAHHNIIKNKKDGYFDIFRNIEKDIINTIDVYPEKILKSIKFGKESNVECCISSYNNDYLITGSSD 240 
WD40-rpts                                        (________________________WD 1_________________

Query      241 GFIEIWNWITGELNLDLEYQKQNNLMIHDNPIVTLCISKDDEILLSGDSKGLIKIWRIKTGICLKIINAHNDSLISIQFN 320 
WD40-rpts      ______)   (_____________________WD 2____________________)   (_________________WD

Query      321 NDQTQILTSSYDKSVKIFGLKSLKCLKEFRKHEDSVVHSAIYTLDNSKIICATDQGKIFIYNQKTLECITSFYVYFNKSE 400 
WD40-rpts       3________________)   (_________________WD 4_________________)   (______________

Query      401 NLIFPSLNNIILINKNLEDHILVCSKSPYCYIMNMKGKIIKTYTNTIDKDKDKDYDSPYFLYACISPNFKYVYCIAEDYN 480 
WD40-rpts      ___WD 5_________________)                   (__________________WD 6_____________

Query      481 LYCFDYNTSKLLNQMKIHDKDILGIIHHNNQNIMASWSLDGKLNIIQ 527 
WD40-rpts      ____)   (_________________WD 7________________)

7 WD40-repeats found in QUERY=EG_MAL13P1.54 (Len=527):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  3   195-247      7.98  444.44  6.4e-05       27.5%     46.93
  WD 2:  Seg  6   251-297      8.97  485.03  1.8e-05       32.5%     46.87
  WD 3:  Seg 10   301-339      9.86  521.83  5.8e-06       25.0%     56.64
  WD 4:  Seg 14   343-382      7.94  442.80  6.7e-05       20.0%     56.32
  WD 5:  Seg 18   386-425      6.96  402.36  0.00024       17.5%     51.09
  WD 6:  Seg 24   445-485      7.34  417.71  0.00015       15.0%     41.58
  WD 7:  Seg 27   489-527      8.21  453.65  4.8e-05       15.0%     50.33

Multiple sequence alignment of 7 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  195-247    IE-KDIINTIDVYPEKI----LKSIKFGKESN-VECCIS-SYNNDYLITGSSDGFIEIWN
   WD 2  251-297    -G-ELN---------LDLEYQKQNNLMIHDNP-IVTLCI-SKDDEILLSGDSKGLIKIWR
   WD 3  301-339    -G-ICL---------KI--------INAHNDS-LISIQF-NNDQTQILTSSYDKSVKIFG
   WD 4  343-382    -L-KCL---------KE--------FRKHEDSVVHSAIY-TLDNSKIICATDQGKIFIYN
   WD 5  386-425    -L-ECI---------TS--------FYVYFNK-SENLIFPSLNNIILINKNLEDHILVCS
   WD 6  445-485    NTIDKD---------KD--------KDYDSPY-FLYACI-SPNFKYVYCIAEDYNLYCFD
   WD 7  489-527    -S-KLL---------NQ--------MKIHDKD-ILGIIH-HNNQNIMASWSLDGKLNIIQ

   WD40 Template    TG-ECL---------RT--------LSGHTSG-VTSVSF-SPDGKRLVSGSEDGTIKVWD