Input parameters:

  Query = EG_MAL13P1.79 (Len=419)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (EG_MAL13P1.79, Len=419):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MRGNYVRDGYKSQYRYANGSDSNSKTQNSNNRRSYYPKKGPNKDKSIIFCPHYTLRGACRFINDCKNLHHLKLVDTFFLQ 80  
WD40-rpts                                                                              (_______

Query       81 RSYIDSAIIVHGPNNEIYLFTAIAPYTINVWIFVPGEGNKEIDIKHLKKIEFELTPEEESYGDEKQKYNNKSKQKKKKKR 160 
WD40-rpts      __________WD 1_________________)   (_________________WD 2________________)(_____

Query      161 VLSLLYAEECIFAGLDNGLIKIMHLPSSDASTLYAHTDSIYSIVCIDGIIISSCINGEVKFWKYDETCSRFVAIKTIETK 240 
WD40-rpts      _______WD 3____________)  (________________WD 4_______________)(________________

Query      241 TKIYKMIEVISPKAATNINNNNTEDNKYNRNLWVCGDSITIINLLNLEIVNNFKCKYGNVVSVIQYEANIITAMSEGKIL 320 
WD40-rpts      ______WD 5_____________________)              (________________WD 6_____________

Query      321 AYSLMGEGHFEMNTLPIYCMAGLTNHQNIPILIYGSNKALYTFSLPEFNPFGYLKDRDSASLKFNLNDPDFIISLSGPYF 400 
WD40-rpts      __)  (_________________WD 7________________)           (_________________WD 8___

Query      401 IVIFSNAGNAKVWKWETKE 419 
WD40-rpts      _____________)     

8 WD40-repeats found in QUERY=EG_MAL13P1.79 (Len=419):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  3    73-112      8.82  478.97  2.2e-05       15.0%     42.73
  WD 2:  Seg  7   116-154      6.77  394.51  0.00030       10.0%     28.66
  WD 3:  Seg 10   155-184      4.39  296.01  0.00637       12.5%     42.95
  WD 4:  Seg 13   187-223      6.57  386.22  0.00039       22.5%     52.50
  WD 5:  Seg 17   224-272      3.66  266.01  0.01608       12.5%     35.19
  WD 6:  Seg 22   287-323      6.19  370.26  0.00064       15.0%     54.25
  WD 7:  Seg 26   326-364      6.00  362.46  0.00081        5.0%     51.53
  WD 8:  Seg 30   376-414      6.69  391.20  0.00033       17.5%     43.92

Multiple sequence alignment of 8 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   73-112    LVD------TFFLQRSYIDSAIIVHGPN---NEIYLFTAIAPYTINVWI
   WD 2  116-154    -GE------GNKEIDIKHLKKIEFELTP---EEESYGDEKQKYNNKSKQ
   WD 3  155-184    ----------------KKKKKRVLSLLY---AEECIFAGLDNGLIKIMH
   WD 4  187-223    -SS------DASTLYAHTDSIYSIVCID---G--IIISSCINGEVKFWK
   WD 5  224-272    YDETCSRFVAIKTIETKTKIYKMIEVISPKAATNINNNNTEDNKYNRNL
   WD 6  287-323    -LE------IVNNFKCKYGNVVSVIQ-----YEANIITAMSEGKILAYS
   WD 7  326-364    -GE------GHFEMNTLPIYCMAGLTNH---QNIPILIYGSNKALYTFS
   WD 8  376-414    -DR------DSASLKFNLNDPDFIISLS---GPYFIVIFSNAGNAKVWK

   WD40 Template    TGE------CLRTLSGHTSGVTSVSFSP---DGKRLVSGSEDGTIKVWD