Input parameters:

  Query = EG_MAL8P1.145 (Len=365)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (EG_MAL8P1.145, Len=365):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MNLNVNIETVGKLSEHKACITKIIFSDDENYILSSSLDNKVCLWNVNTHLHINTYKDVHKKGINDIALFRDNTKFFSAGN 80  
WD40-rpts           (_________________WD 1_________________)(___________________WD 2___________

Query       81 DLYVYLWDTLSNKILNRINVNDKINVIRLSTNEKLLFCSKNNAVNIYDFRERDFKKKNNPLQIFNEAKDWISDFIVDDFE 160 
WD40-rpts      _______)   (________________WD 3_______________)         (________________WD 4__

Query      161 VYTCSIDNILRIYDLRMGKLMSYDMKSSILSIDITNDKNYFCVNLIDNTIKLVEKNSGTVLGLYKGDINNKHKRNIKLDT 240 
WD40-rpts      _____________)(_________________WD 5_________________)   (__________________WD 6

Query      241 KNKYIFSCSHKNEIVVYDIVRSNTINNTIFYENLEYEEDLDIYKNTYFQLNIGKPTYYLNVNKNILPENSYIDREKYKSI 320 
WD40-rpts      _________________)   (_________________WD 7________________)                    

Query      321 LNKYKYYGKKKKDIDSSDKDFQNINNKLVCGDIDGNIHILQLYYT 365 
WD40-rpts        (_________________WD 8________________)    

8 WD40-repeats found in QUERY=EG_MAL8P1.145 (Len=365):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  2     6-45      11.11  573.61  1.2e-06       30.0%     57.86
  WD 2:  Seg  6    46-88       7.94  442.49  6.8e-05       20.0%     53.25
  WD 3:  Seg 10    92-128      6.13  368.01  0.00068       15.0%     53.47
  WD 4:  Seg 14   138-174      6.15  368.66  0.00067       15.0%     44.91
  WD 5:  Seg 18   175-214      8.59  469.45  2.9e-05       17.5%     54.54
  WD 6:  Seg 22   218-258      7.63  429.89  1.0e-04       22.5%     58.15
  WD 7:  Seg 26   262-300      6.80  395.52  0.00029        0.0%     54.42
  WD 8:  Seg 30   323-361      6.34  376.73  0.00052       17.5%     38.02

Multiple sequence alignment of 8 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    6-45     NIETVGK---LSEHKAC--ITKIIFSDDENYILSSSLDNKVCLWN
   WD 2   46-88     VNTHLHINTYKDVHKKG--INDIALFRDNTKFFSAGNDLYVYLWD
   WD 3   92-128    -NKILNR---INVNDK---INVIRLSTNEK-LLFCSKNNAVNIYD
   WD 4  138-174    -NNPLQI---FNEAKDW--I--SDFIVDDFEVYTCSIDNILRIYD
   WD 5  175-214    LRMGKLM---SYDMKSS--ILSIDITNDKNYFCVNLIDNTIKLVE
   WD 6  218-258    -GTVLGL---YKGDINNKHKRNIKLDTKNKYIFSCSHKNEIVVYD
   WD 7  262-300    -SNTINN---TIFYENL--EYEEDLDIYKNTYFQLNIGKPTYYLN
   WD 8  323-361    -KYKYYG---KKKKDID--SSDKDFQNINNKLVCGDIDGNIHILQ

   WD40 Template    TGECLRT---LSGHTSG--VTSVSFSPDGKRLVSGSEDGTIKVWD