Input parameters:

  Query = EG_MAL8P1.43 (Len=324)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (EG_MAL8P1.43, Len=324):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MALIKADTYVLERDENNEVEERKTGLFSPTMLINSHKGEVYSINFSSDGKYIASSSFDMTIMVHNVYNECETIGVLRGHK 80  
WD40-rpts                                (_________________WD 1________________)    (__________

Query       81 NAVLQAKWLQDDNYICSASADHKLFLWDVECESKLRSFKGHDNIVNGLDIINHNLFVSCSDDNTLKFWDIRSKWAVHIIK 160 
WD40-rpts      _______WD 2________________)   (________________WD 3________________)  (________

Query      161 HDFPLLSVCSDKKGEFLFTSCVDNTIKKYDCKNYKLKDTFIGHKDYITGLDINKDETMLASISADESICFWDIQPFSCEE 240 
WD40-rpts      _________WD 4________________)   (_________________WD 5________________)   (____

Query      241 KLLFQLNSPKYNIDYNLIKLSFNNDNLLACGSGDNYLYIYDYKQKILKYSLPGHTSTINDVAFHPVEDIVASCSSDHTIF 320 
WD40-rpts      ________________WD 6____________________)   (_________________WD 7______________

Query      321 LGEI 324 
WD40-rpts      __) 

7 WD40-repeats found in QUERY=EG_MAL8P1.43 (Len=324):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  4    27-65       8.96  484.91  1.8e-05       35.0%     52.34
  WD 2:  Seg  8    70-108      9.36  501.45  1.1e-05       27.5%     55.60
  WD 3:  Seg 12   112-149      7.99  444.51  6.4e-05       32.5%     55.19
  WD 4:  Seg 16   152-190      7.98  444.28  6.4e-05       25.0%     56.00
  WD 5:  Seg 20   194-232      9.37  501.64  1.1e-05       30.0%     53.41
  WD 6:  Seg 24   236-281      5.78  353.39  0.00107       25.0%     49.40
  WD 7:  Seg 28   285-323      9.17  493.55  1.4e-05       32.5%     54.55

Multiple sequence alignment of 7 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   27-65     FSPTMLINSHKGE--------VYSINFSSDGKYIASSSFDMTIMVHN
   WD 2   70-108    CETIGVLRGHKNA--------VLQAKWLQDDNYICSASADHKLFLWD
   WD 3  112-149    ESKLRSFKGHDNI--------VNGLDI-INHNLFVSCSDDNTLKFWD
   WD 4  152-190    SKWAVHIIKHDFP--------LLSVCSDKKGEFLFTSCVDNTIKKYD
   WD 5  194-232    YKLKDTFIGHKDY--------ITGLDINKDETMLASISADESICFWD
   WD 6  236-281    FSCEEKLLFQLNSPKYNIDYNLIKLSFNNDN-LLACGSGDNYLYIYD
   WD 7  285-323    KILKYSLPGHTST--------INDVAFHPVEDIVASCSSDHTIFLGE

   WD40 Template    GECLRTLSGHTSG--------VTSVSFSPDGKRLVSGSEDGTIKVWD