Input parameters:

  Query = EG_PF10_0196 (Len=769)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (EG_PF10_0196, Len=769):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MNLPVYNMESISECDILKPIDESERIELENKINEQMVELEVKKKYLEELKKRQHSVKEKNNIHSFNNVVEEYPDPNKMLC 80  
WD40-rpts                                                                                      

Query       81 NFLESLENNTNDNNNHHHNDKESKEQVNDLSIYSEYDYDNKKKTTKKENFTYTEQFFTHPNSMDNIMMNKSFLFQKKKNS 160 
WD40-rpts                                                                                      

Query      161 IPNFNFHIDLFNKQTKNVIHIQPKGINYFDKSIQVDLLENNEIYLLDNHINKKINKMEKKENIEKMENIEKLGNIKKTSL 240 
WD40-rpts                                                                                      

Query      241 CYSTEDKSEGDSKSHHKNKIKHTNDTSIHNDDKKKEIKGGNKNNEINKNLEENYNKQNGHHNYIYDENNTTFNYNDNKNN 320 
WD40-rpts                                                                                      

Query      321 SVYVEHNDNRFNAYNNSTHLKSMNVEKKKDEILKSSSFLYFLENSSKIVERVLGEQDLFDCTYTYDNNDMLENTQDVDKL 400 
WD40-rpts                                                                                      

Query      401 KLMNTYYCKKYINGRGITDVRTSNIYNELFLASYGLSECSNCIEPEGYVLLWNVTMKNRPEYVFTSESSVCTALFNKFHP 480 
WD40-rpts                                                           (___________________WD 1___

Query      481 HLIIGGTYTGNVVLWDIRASLKPIQQTLLTSQGHMHSIYCAEIIGTQNSHNLITADTDGRLCNWSLSMFTYPSNTIDLKK 560 
WD40-rpts      _______________)        (__________________WD 2_________________)               

Query      561 GNREISCTTFAFPEGDINTLYGGTEDGTLFQAQIHGMKVGIINSDIIHDGPITSAQFHPSLDEMNDNNDLILTSSVDWTC 640 
WD40-rpts                                        (______________________WD 3___________________

Query      641 QLLSIKNIKNPLIVFDSFEDYIMDIKWSPTHPALFSTCSSNGKIKLWNILYDTESSFYEASLDNSSTNKLAWSHDGKRLI 720 
WD40-rpts      ___)(___________________WD 4___________________)     (_________________WD 5_____

Query      721 AADTQGCLTLWNASSEIYQPKFEDLNKFDEHMQTLKAERIADTTSEKET 769 
WD40-rpts      ___________)                                     

5 WD40-repeats found in QUERY=EG_PF10_0196 (Len=769):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  6   454-496      3.94  277.40  0.01132       20.0%     44.21
  WD 2:  Seg 10   505-545      4.51  301.10  0.00544       20.0%     45.86
  WD 3:  Seg 17   595-644      4.62  305.39  0.00476       22.5%     49.93
  WD 4:  Seg 21   645-688      4.14  285.67  0.00877       22.5%     53.39
  WD 5:  Seg 25   694-732      4.92  317.91  0.00323       25.0%     54.40

Multiple sequence alignment of 5 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  454-496    VT---MKNRPEYVFTSESSVCTALF--NK------FHPHLI-IGGTYTGNVVLWD
   WD 2  505-545    -Q---QTLL--TSQGHMHSIYCAEIIGTQ-------NSHNL-ITADTDGRLCNWS
   WD 3  595-644    HGMKVGIIN--SDIIHDGPITSAQF--HPSLDEMNDNNDLI-LTSSVDWTCQLLS
   WD 4  645-688    IKNIKNPLI--VFDSFEDYIMDIKW--SP-------THPALFSTCSSNGKIKLWN
   WD 5  694-732    -E---SSFY--EASLDNSSTNKLAW--SH-------DGKRL-IAADTQGCLTLWN

   WD40 Template    TG---ECLR--TLSGHTSGVTSVSF--SP-------DGKRL-VSGSEDGTIKVWD