Input parameters:

  Query = EG_PF10_0285 (Len=555)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (EG_PF10_0285, Len=555):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MNGKNIEDEEIENVEDVDDDVIFEGIENKNDIIDLSSDDEDDEELYKNSTDINDEIIKYKEKYISYNKKFYTNKSIYCIN 80  
WD40-rpts                                                                                      

Query       81 SFKKWIYFGSINNKCYLYNNFDDDLKNYIMSITRHNNNYNNNDYNNICSSNNYDNINFGDEKNKKINLRDLKHQIYSDTI 160 
WD40-rpts                                                                                      

Query      161 TNIKISNNFQYVALSIYNGDIYIYENNNHNSSEIINYNLNNMKKNINNSNCLLDICNWDMEKKTNEYILNENMKLINILS 240 
WD40-rpts                                                                                      

Query      241 INNDNEKRDLEYSMFCLYHEHIFISIYVNCTNIYIWDVLEGTPINIIHTIQVPTFLNLCNYENKYYMIVGFNNGESCVYD 320 
WD40-rpts                                                                                      

Query      321 YDIYNAKKIGKIQGKHDDNNKYSDIYKNVHGNTYTNSHNNNNNNNNNCYYNDDDINDGVLCIDNNLGNEIYTCTFKNVIK 400 
WD40-rpts                                                                                 (____

Query      401 IYNINNNNLINTYTNLHDDLIDYCLFNNKKYNLFASCSLDNKINIHDFQHNKSINQFYVNYHFNEPHTNEQTEKGINYLK 480 
WD40-rpts      ___________________WD 1_______________________)                                 

Query      481 WINSNLLLFTSLNGNIYIYDIRSRKCIHQFYSHTDTIFNVNLSLHLYQNKNILSILTASDDNSSNMHLLDISPYL 555 
WD40-rpts                                                                                 

1 WD40-repeats found in QUERY=EG_PF10_0285 (Len=555):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg 21   396-447      4.13  285.22  0.00889       15.0%     37.51

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  396-447    KNVIKIYNINNNNLINTYTNLHDDLIDYCLFNNKKYNLFASCSLDNKINIHD

   WD40 Template    TGECLRTLSGHTSGVTSVSFSPDG------------KRLVSGSEDGTIKVWD