Input parameters:

  Query = EG_PF10_0326 (Len=709)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (EG_PF10_0326, Len=709):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MDDSEDVVGDDEYLDEFSDEGDSNEFLSDVEKNSNNSLDDKSKGGKCLDEESICEDKIKYDKSSIYNSYNNSCDIFNLKE 80  
WD40-rpts      (_________________WD 1________________)                                         

Query       81 EVLGIHKKNICCIKLIRNGSNLIISGNDNNVRIYEFKNMNRYEKNYTKLVSLKEGSIIQSLDARDNYILIAHGNKCFVYN 160 
WD40-rpts         (_____________WD 2_____________)       (________________WD 3________________)

Query      161 KNGEYIKNSIRGDMYIKDVNKTKGHTRQINCCRFHPLNEQVFISGSLDSTIRIWDMEKENNTYGLNKELIHSQCIKVVNE 240 
WD40-rpts                     (_________________WD 4_________________)                   (_____

Query      241 KNLLTNNIISCEFTKDANSIIIGCSNGLIDIRNKLSNDYTYNYKSSDNYYIKKDVCHKDSIIDILTCKKNKNYFFTRSMD 320 
WD40-rpts      ____________WD 5________________)          (___________________WD 6_____________

Query      321 NTIKYWDLRNLHLCLHTIQDVPTIYEKSNMSYFHNEKYLIIGTQQKKKNDSILLDEHVNYISSNVNNKNNTHDIKYRQKV 400 
WD40-rpts      ______)(____________________WD 7___________________)                            

Query      401 EDFENSQNDYDCTEETDIRKNKYKNKEEEEEEEEKKKKKKKCIINNNYIKEYKGDEDMNNFLTEMSSLNKIEKNIFGSIQ 480 
WD40-rpts                                                                                      

Query      481 IYDIENNFNLVYTKNYECSGIICTYYDEYIKQLFLGTTDGRCLIYYGDNSKKGVLDYLQQKGYKRKDETNENTFFYMKND 560 
WD40-rpts         (___________________WD 8__________________)                 (________________

Query      561 NIYNLDNLPKEIQITQSGNVIIKKNNLNNKKIKVNPSVQSLYQNAYERKTNVSAYAKFITDDNNNNLNYHDDIKNISNIK 640 
WD40-rpts      _________________WD 9________________________________)                          

Query      641 DDNIVEVLRNRELNKKGDDYFMKAYKYTQPNKIIDYSSSDEQEYSNILKRPKCPQCGIKNCVCGYMKNK 709 
WD40-rpts                                                                           

9 WD40-repeats found in QUERY=EG_PF10_0326 (Len=709):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     1-39       6.51  383.37  0.00042       15.0%     -6.52
  WD 2:  Seg  2    84-115      6.77  394.13  0.00030       10.0%     45.74
  WD 3:  Seg  5   123-160      4.66  307.05  0.00452       10.0%     48.81
  WD 4:  Seg 10   176-215      8.19  452.94  4.9e-05       32.5%     43.97
  WD 5:  Seg 14   235-273      6.89  399.28  0.00026       17.5%     46.03
  WD 6:  Seg 19   284-327      7.92  442.00  6.9e-05       20.0%     51.22
  WD 7:  Seg 23   328-372      5.36  336.26  0.00183       17.5%     40.71
  WD 8:  Seg 30   484-526      7.49  423.89  0.00012       20.0%     58.89
  WD 9:  Seg 34   544-614      3.12  243.47  0.03212        7.5%      1.94

Multiple sequence alignment of 9 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    1-39     -M----D---DSE-------------------------------DVVGDDE--YLDEFSDEG-DSNEFLSDVEKNSNNSLD
   WD 2   84-115    ----------------------------------------------GIHKK--NICCIKLIR-NGSNLIISGNDNNVRIYE
   WD 3  123-160    -E----K---NYT-------------------------------KLVSLKE--GSIIQSLDA-RDNYILIAHGN-KCFVYN
   WD 4  176-215    -I----K---DVN-------------------------------KTKGHTR--QINCCRFHPLNEQVFISGSLDSTIRIWD
   WD 5  235-273    -I----K---VVN-------------------------------EKNLLTN--NIISCEFTK-DANSIIIGCSNGLIDIRN
   WD 6  284-327    KSSDNYY---IKK-------------------------------DVCHKDS--IIDILTCKK-NKNYFFTRSMDNTIKYWD
   WD 7  328-372    LR----NLHLCLH-------------------------------TIQDVPTIYEKSNMSYFH-NEKYLIIGTQQKKKNDSI
   WD 8  484-526    IE-NNFN---LVY-------------------------------TKNYECS--GIICTYYDE-YIKQLFLGTTDGRCLIYY
   WD 9  544-614    KR----K---DETNENTFFYMKNDNIYNLDNLPKEIQITQSGNVIIKKNNL--NNKKIKVNP-SVQSLYQNAYERKTNVSA

   WD40 Template    TG----E---CLR-------------------------------TLSGHTS--GVTSVSFSP-DGKRLVSGSEDGTIKVWD