Input parameters:

  Query = EG_PF10_0335 (Len=1511)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (EG_PF10_0335, Len=1511):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MVNQKNGILSKLTGLTSTLFKLNIEDINEEVDENTNPLEKAILYGNSNVKCRKILFLKDIMKLLNHINYENFLKYIYPLI 80  
WD40-rpts                                                 (____________________________________

Query       81 VKLSNDDIEIQNEVCNRVGDLCAYLIQNNNHNDGCTDIMKLLFPIVEKFIKNNENKNIIETIMKSLLILSTHINWKYRQK 160 
WD40-rpts      ___________________________________WD 1_________________________________________

Query      161 FILPFILSLISNDKYKYIGFILLIKLCSIFERNIFCSFLIPSIKSILRKNDHLENKIYISCYLYNICKMLKKEDDLFHIF 240 
WD40-rpts      ______________________________)                                                 

Query      241 LLLKNLCNDPSDTIKIINIFNSTHISLLYSKNIFFYFFVPLYNHFLRNENIYVFYYSLINLFYFICIFEDINLIHPYYIH 320 
WD40-rpts                                                                                      

Query      321 KMIFFFNNMFSSHTFTLNYLNETAKKKSNYFFLNNNNNNNNNNINEQNRFNHITLKYQASGIQMNNNINNNPNTKLKDMK 400 
WD40-rpts                                                                                      

Query      401 KKNDILYHSTYEQHKQNEEPCLIIDEIEDIDNAFKIKAFSDNVCDIDVSFNVPEAIKQDHSDGCDKLIKTGKEVAECLYV 480 
WD40-rpts                                                                                      

Query      481 KRDMEQENLNFCMMQESYKSEHMYDQRGDMYEHHEMLHGNYEMYEMNQTKDDYSDQKVGDLNTKLCNQLYIENHKKGSYN 560 
WD40-rpts                                                                                      

Query      561 IKNNVDIYTHLSKINKETEINAQRCDNEFNDIFIKGQNKEDKLESNDKYSKVSSKENEENEKINQTLITNGLKNDKTNGL 640 
WD40-rpts                                                                                      

Query      641 SYIEDKINFICMNKLTNTKRGHNINKDENLHMDNKKNNNLLDQNISNDVVLKNDCHFLNDNFTTVPSIFYNNNLFNDLII 720 
WD40-rpts                                                                                      

Query      721 NNNHFSISIKQFFEMYSNNFKYKHFVVMEKNENDGSTDSNDLFDDNNTIINIEKRNSMQARNNPDYDYNTFCIPMNDEVL 800 
WD40-rpts                                                                                      

Query      801 QDIDNTFIHDTNIDIDIIKSCYYNESELIRKNVAYGKMFVKRKNEDNKNKNKNLSSNNINYNNDETDDIYNVGKMDIDSI 880 
WD40-rpts                                                                                      

Query      881 KQKFIFDSTNNVIVSHNINAVYITALHLPLLILVFKEYFFRFFSHIFYFICTYPYYIIRKTMAYNFYDILKNMFDSEFLK 960 
WD40-rpts                                                                                      

Query      961 IDMGKFKKRGNEKRFNKILQKRNNILYKENMEKNILSERYMKDEKMNNNKSSGGTKKESLDIQINAMFNNDYATYYNMRR 1040
WD40-rpts                                                                                      

Query     1041 IQNMVIDDEKLEKEKDDNKMEEHDKDENKKEKEKEKEKENENENEKEKENENEKENENEKENENEKENEKEKENNIIKGE 1120
WD40-rpts                                                                                      

Query     1121 LLKENIKIEDNIYSEDLLIDNEEKYESEKYEEDKTYQSSENNIYDSNNYEKHIRKLQNHININLYESDFFVNEENENFFF 1200
WD40-rpts                                                                                      

Query     1201 YKQFLMKYENMYKRHIQTFKTYYKEDDSPCFFFHFFIYYFLNDSNVLVKKAILKNYDKLLTFFPYHIKLILISYLYNVID 1280
WD40-rpts                                                                                      

Query     1281 YKILNYSLRKRVSKIVFKILQNVNDSKIIRDYIFPIYLKLCKDEVATIRTYTASYFYIILQKGCPNLYKFFKGKGKILDI 1360
WD40-rpts                                                                                      

Query     1361 EEYQKDIFVSNENGFKLKSEDFIRGKEVTLIRKIINTFATSKYYYDRQLFINICDGIISECPINLFLLYFLNPFINLSDD 1440
WD40-rpts                                                                                      

Query     1441 KIQVVRITWEMCVYSQLKKKGDFSNIANVYKKLEEMYLKYGKTTVSKINPIKYNNPDSIFIVSFDLHHISN 1511
WD40-rpts                                                                             

1 WD40-repeats found in QUERY=EG_PF10_0335 (Len=1511):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1    44-191      2.93  235.77  0.04061       25.0%     31.67

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   44-191    YGNSNVKCRKILFLKDIMKLLNHINYENFLKYIYPLIVKLSNDDIEIQNEVCNRVGDLCAYLIQNNNHNDGCTDIMKLLFPIVEKFIKNNENKNIIETIMKSLLILSTHINWKYRQKFILPFILSLISNDKYKYIGFILLIKLCSIFE

   WD40 Template    TG----ECLRTLS--------GHTSG----------VTSVSFS-------------------------PDG--------------------K------------------------------RLVSGSEDGTIKV-----------WD