Input parameters:

  Query = EG_PF11_0242 (Len=2265)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (EG_PF11_0242, Len=2265):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MGLQTEKDKEKEHQKNNFKICSKKFETDELEVLKKIYKELGSRSGSSYIDKETFLQFFPLPGLWGERLFLKFNFKNTGFI 80  
WD40-rpts                                                                                      

Query       81 DFEEFIIGIAICCRGTKSDKINVLFDIFDLNADGFIQKSEMVAMLSNIPYIHKLKNIFFNKDNRKNIYRDDYTKDDDNAD 160 
WD40-rpts                                                                                      

Query      161 DENEDHENGDAIIDSNVGTNSDGNIDIDSDADVEYNDSDSDDFTIDDDEDVDSLDDISDSFSSAYEDEDEYSNNNNNNNN 240 
WD40-rpts                                                                                      

Query      241 NNIENMNISSDNKNVEENNIGNCSKCIKQQKNKALNANINSKRNANGNNTSLNVKELAKKIRKEEKRKFVKKLRELNAVH 320 
WD40-rpts                                                                                      

Query      321 LYKDNQLSNKKEKDKERKKKNKDPNVSKNSPFFKSESEDYNSSSSNNTDAFVHDHIKYINKYKKKSLKNEVKKNGHKYKD 400 
WD40-rpts                                                                                      

Query      401 TTNPYISSTTDSSTSNESNYNINNDEFESCSSNKDHREVCSSDTSDSFISIYGYLIKNRRSKNIKEKNHHSKEKDKKDQD 480 
WD40-rpts                                                                                      

Query      481 VKGKNKADDNIKRKEKGDDEIKRKDKPLDDIKEKEQIKYEAKNKDHKMKEEISEGKENLKYKDVEKKKDGEKNKDGEKNK 560 
WD40-rpts                                                                                      

Query      561 DGEKNKDGEKNKDGEKKKDGEKKKDGEKEEGKNEEKENEEENKIKKEKCFTRNDINIYKKEKKKEKKKNKLYVNEFCLPS 640 
WD40-rpts                                                                                      

Query      641 KTARSILNDEENNKPSDKNVDVEAIVDIMLEECEFLDNDKITLIQFKSVIHKYDFFLYIFFNCLHEDIWGLQGNVLYGRD 720 
WD40-rpts                                                                                      

Query      721 YISNFVIKSENFKNKEIEQDEDDAITEELYFKIRQLFIVQAPDYDCVNDDLCVNFLNTKNIEQDIKEDDEEEKEKEEKKN 800 
WD40-rpts                                                                                      

Query      801 GADKKDTIEKEEEEYITNNFSKDKNDTSINKKKTKNENNAKLVSFVSDIKTGEENIVDKDKIKEYEKEYSIHKDKDDKKN 880 
WD40-rpts                                                                                      

Query      881 ANSSFESEHEDLKRQFINMKEKKKKSLKEKDELNNMKEDNKIYKKLEEYDKKSINNIENQNENQNENQNENQNENQNENQ 960 
WD40-rpts                                                                                      

Query      961 NENQNENQNENQNENQNENQNENQNENQNENQNENQNENQNENQNENQKNNNNILKEKNSYEDDKGKIKVINNEIKKSVH 1040
WD40-rpts                                                                                      

Query     1041 HLSDNVSDLSYDEKWLKLSSNGTNKKKELNNDNSNNFDESQRIQEYQNDNKNNVIEENNILINQKKNSHNMKEDSINIQV 1120
WD40-rpts                                                                                      

Query     1121 DMKSNIHMNIIINKVNDMNDVNDVNNANDVNNVNDVNNVNDMNNVEGINNEQKENDFVKMNKQNTNRNELMSKKDIVGKN 1200
WD40-rpts                                                                                      

Query     1201 NTTIINNNMTNLNDDLLNVENTENKNRYECDFNLLTNQLNDIFSKEIVEFIQASKISFNINDVCKERNLHKKKERLQKGR 1280
WD40-rpts                                                                                      

Query     1281 RNYLKNNKNNLNISLNYQKQKKYPFNKLFLEELEKDEKNEEINKAEEHVTDESSFEYNQNGVFRNKVVPTKTNKNVSTIN 1360
WD40-rpts                                                                                      

Query     1361 NQNNEEDMKQKEKDVNEQTVEKKEDNNILINKLCKKKSFSGLKLQNIEKMDILEKFGLSYKKSEKTSLGCSIFHNKVDEK 1440
WD40-rpts                                                                                      

Query     1441 RGSFSKSQDGIEADVIKQGELNNEKVKKNETNDDKAKKNETYDDKAKKNETYDDKAKKNETYDDKAKKNETYDDKAKKNE 1520
WD40-rpts                                                                                      

Query     1521 TYDDKAKKNETYDEKVKKNETYDEKVKKNETYDEKVKKNETYDEKVKKNEQKCEDLKEPISNVDKISYQKSTSDKDLSKK 1600
WD40-rpts                                                                                      

Query     1601 KNSNVGALNKMDTFKKDESSSNDMASSYFSSNKKKKYDLTKKHGKDINLYSCPNCKGPFLMCPNCHCRYPRFCVNDNKIA 1680
WD40-rpts                                                                                      

Query     1681 MECEYCDCEHCYFYNCIYCNFDFQKCLDMIKKNSLKEGILYKIGKHLHQFKARYYILFDNLLYYYDKKRNLKPRGFMFLE 1760
WD40-rpts                                                                                      

Query     1761 GCYVELIAKNDNINKYGFSICHKGTKQVQKRNLYVNTLEERDEWVQALYSSTKQNTLYNLYELHEQLGQGKFSTVYRGIN 1840
WD40-rpts                                                                                      

Query     1841 KQTNSEFAIKVIDKRSVSIYEKELLRSEISILRLLRHPNVIYLKEIINTKETLYISMELVKGGELYDFLLAETRLSEIHA 1920
WD40-rpts                                                      (_______________________________

Query     1921 NKIITQLIKTVAYLHRCGIIHRDIKPENILLTDKSRDAQIKLTDFGLSTLCAPNELLKEPCGTLAYVAPEVITLQGYNHK 2000
WD40-rpts      ____WD 1___________________________________)                                    

Query     2001 VDAWSIGIILYLLLSGKLPFPINKNTEMNIQKNYVLSFKDYIWKSISSSAKDLISKLLELNVEKRISANEALEHIWVKNP 2080
WD40-rpts                                                                                      

Query     2081 TAVINENSFIYKNEEINILNLQDVSVSTFNIPRYTPLHIEEEKNTEEIENKELIFNIHENNILCENNDSIDEPVIPLPYS 2160
WD40-rpts                                                                                      

Query     2161 SAPLKEHINEKKNIQNISSPMEDISMNKQENAVYESINKETSNPMKNCSQNVRDQNDTTPHHNNENQNEQGNLNTCIHKI 2240
WD40-rpts                                                                                      

Query     2241 NECKKSSTDGHTVQINDNTNKEHDK 2265
WD40-rpts                               

1 WD40-repeats found in QUERY=EG_PF11_0242 (Len=2265):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg 25  1889-1964     3.08  241.83  0.03376       30.0%     11.97

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1 1889-1964   TKETLYISMELVKGGELYDFLLAETRLSEIHANKIITQLIKTVAYLHRCGIIHRDIKPENILLTDKSRDAQIKLTD

   WD40 Template    TGECLRTLSGHTSGVT---------SVS---------------------------FSPDGKRLVSGSEDGTIKVWD