Input parameters:

  Query = EG_PF11_0322 (Len=381)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (EG_PF11_0322, Len=381):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MIDEEKKIKIEINNINTIILDILCTEAIRKIKFILHILNELLKKKKNILHVYITNKIDHLSTHKKQRQIFQSLQNKIELC 80  
WD40-rpts      (_____________________________________________________________WD 1______________

Query       81 ENESHYNLIQKQIDEYINFLSETNEILCQNSPTDRNIKENRNKIIEDGNLLLNIFRKMKKKKFSSILNELEKFKDEQNLL 160 
WD40-rpts      ______________________________________________)                                 

Query      161 INLNQNVYHKKQIINILKEEIKEQMENTKRKRINIENKIKEIEKRKKIFFVKFMLYYIYKKEYVHANVAHYNRNMDFKEN 240 
WD40-rpts                                                                                      

Query      241 AVTKSKENMENELKAYDDINDFIKSFLNKRNDNLQNIHDELIEYYEKEKDQKNAQLDNIKKEIEHSREIIELKKKKIIKY 320 
WD40-rpts                                                                                      

Query      321 DEINKEREKEEKIKMKKEIENKEFLKKYNECILFLQNVGRNKIKAYDEKMKRKKKTKKKKK 381 
WD40-rpts                                                                   

1 WD40-repeats found in QUERY=EG_PF11_0322 (Len=381):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     1-127      3.23  248.02  0.02795       15.0%     19.10

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    1-127    MIDEEKKIKIEINNINTIILDILCTEAIRKIKFILHILNELLKKKKNILHVYITNKIDHLSTHKKQRQIFQSLQNKIELCENESHYNLIQKQIDEYINFLSETNEILCQNSPTDRNIKENRNKIIED

   WD40 Template    TGECLRTLSGHTSG---------------------------------VTSVSFSPDGKRLVS--------------------GS----------------------------EDGTI------KVWD