Input parameters:

  Query = EG_PF11_0368 (Len=1818)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (EG_PF11_0368, Len=1818):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MNDKDKLHKKKEKYANLNDDVEYEEIEKKMKRRKVEKKFTNTNIMEYKLNIHNNIFLKHMKENKEKYEKIDNVEKIYRKL 80  
WD40-rpts                                                                                      

Query       81 KADIISLNISYVQMEHYDSFFYYEKNKIDFILPELDNIINSSNIDTLKDLCDISFYPIYNPTLGKRIIEWLTKDRNNNDK 160 
WD40-rpts                                                                                      

Query      161 KEYTESVNMSYLFSLNILLSYLIYKNDDNSNYSCMIYLNMLHWMHNDKKILKFRLFILKGILKRFLFCCSYFNDKEILKL 240 
WD40-rpts                                                                                      

Query      241 KKIENDSVIDEEKLDVLKNIFLTLHNSVEYIDISNLLNINDKNCIFELIKFFIELIKRPLIYSLHILCVNYLIKIVKSCY 320 
WD40-rpts                                                                                      

Query      321 DFRFTYNINVELYDIGPEVNIFVKIINLILAKILSVIKDTKNDENMFCLEQINNINNLITLFFINILNNCVRIIIPQVLI 400 
WD40-rpts                                                                                      

Query      401 NDKLKKQYLLNNENKYNREANTNNDDKIFEDEVVVNACNPIFSFIEIFIINHSDKYEKNVFIELIKILIKECRKIEKRYN 480 
WD40-rpts                                                                                      

Query      481 IMKMISDEYILFIKDGDSKRKHDKSIDTNYIKNRKVSRKRFDSNASFKLSDEYSSSIYSETEDEDKNEDDVHKNGIRNIT 560 
WD40-rpts                                                                                      

Query      561 NNQNGINVNDGDDNNKRNNEINEETNEITMKESTKINKDDIISSQGEEQIKSNESPEAIDDLNEINKQPKKKVYRNNFIN 640 
WD40-rpts                                                                                      

Query      641 KLNYKRKGTFHIDNKRYYITYESVMVRYLNLLLKYMNCERYQIRNTMLDLFLSLIKKKRTNKNESIFQSIFKLFLERLED 720 
WD40-rpts                                                                                      

Query      721 PNVIVKAKALSMLVTLTNKKYYDNSLIYKFIFNKMNEKINMYKIISSNIYSNRSNIRKVIIQYIEAIFETLIHKKLNYKI 800 
WD40-rpts                                                                                      

Query      801 FFFFVCNYLCTLSLDAMSSVRRQVLLTVNNLFINASHDFHITKIWIAIIFSAITDIEETIKDECVSIFLNTFIKPAFSSS 880 
WD40-rpts                                                                                      

Query      881 LLNINENKIKQVLKKYNITYFKINQELVEKISMKYLNENPRKYECSDMPNKVPIISLSDDTKNNKFKNENNIDYNNEEGK 960 
WD40-rpts                     (_______________________WD 1_______________________)             

Query      961 IYEDNNYSNINMDKIMEEKKNKNLKKQSDEEYDRNNDGILYLIHLCNIYFENDFNNTFICILKYMTKYDLLHFNIIISYL 1040
WD40-rpts                                                                                      

Query     1041 KKKKNNTLEEFIHFLNSFLYNMRYFSIKVLNTFLLDFIIQLSKEYQKKIKFENVLFLLNRCYEIYLMNINNMNSGSNIEL 1120
WD40-rpts                                                                                      

Query     1121 YNNKYKTNHLEKKDNNDHSNDNISNVVLNDNIEEKENNILIDHILSNEDLIYEKEICTNGILKNILLKLFTILYNLLDTT 1200
WD40-rpts                                                                                      

Query     1201 EEELDESFLVKMENTIYHFNCPICFIYIILNIIRKKKKNINEFIEKLKNKIVYFFEHIESIELNNIFCNILITFIFLIND 1280
WD40-rpts                                                                                      

Query     1281 FKKGDTFLNMVCIKLKRIYENIDNTEMNTTSNNNNNNNNISGSDNNNNNIIFGSNNSSCNNNIMIKNCIYLTQSILVIDK 1360
WD40-rpts                                                                                      

Query     1361 SVSIRNDLFLNFEKDLKNVNTCMNILNNLIILIYYMIINFGSSCNKFVFVLLRFFKHDNSFLRYLSFYVLSKLLSEDYIK 1440
WD40-rpts                                                                                      

Query     1441 YNNQFFFGVLYLLADKNEIIRKQSLSVFKHILMMYSNKTNIINYIIECIFVLNNFYNFKLSKHLIHIGNIFHIHNKIDRY 1520
WD40-rpts                                                                                      

Query     1521 KIYSYLLENLSNSEKFSLQQKLINEYLIQYVYNYDNYYFEEDDDIRNENSKLKKKTILPLNDEDNEGSVLLDVLNILSCK 1600
WD40-rpts                                                                                      

Query     1601 LMKIKIKKDFAPKLEEKNKNIRIKNVENSVKVLNDLMKNILKKNTLPILLSLRTIMFKTKSFFFKYINNLIIYLCIDYKD 1680
WD40-rpts                                                                                      

Query     1681 SIEELINETHIRNEIIIDFQNFIYVDSILLHAEQYNHLFFDKNKNININFLEHSENIFDTQINHHQNKAKKNKRNKKYYH 1760
WD40-rpts                                                                                      

Query     1761 LMDNNHNNNNDKKNNNNYSYYTSSDEYQQVEKVLHGISSDSDEYAQKKKKKKNNKIKK 1818
WD40-rpts                                                                

1 WD40-repeats found in QUERY=EG_PF11_0368 (Len=1818):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg 19   896-947      3.37  254.03  0.02325       12.5%     14.50

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  896-947    YNITYFKINQELVEKISMKYLNENPRKYECSDMPNKVPIISLSDDTKNNKFK

   WD40 Template    TGECLRT------------LSGHTSGVTSVSFSPDGKRLVSGSEDGTIKVWD