Input parameters:

  Query = EG_PF13_0010 (Len=377)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (EG_PF13_0010, Len=377):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MRLSNATNIKSAGDSNCKNFSSKNSSKYSLMDVQERNEKKSSLSSFHSKQIILIFGIIYVALLNVYICGDKYQQDADYSF 80  
WD40-rpts                                                                                      

Query       81 TEGRVLAQCEFACTNNTKTSLRKCAQTTTTSADPEGQIMKAWAADPEYRKHINVLYQILTHTDPNDETSADPEGQIMKAW 160 
WD40-rpts             (______________________WD 1_____________________)                        

Query      161 AADPEYRKHVNVLYQILTHTDPNDETSADPEGQIMKAWAADPEYRKHVNVLYQILTHTDPNDETSADPEGQIMKAWAADP 240 
WD40-rpts                                                                                      

Query      241 EYLKHVNVLYQILTHTDPNDETSADPEGQIMKAWAADPEYLKHVNVLYQILTNTDPNDETSADPEGQIMKAWAADPVYRK 320 
WD40-rpts                                                                                      

Query      321 HVNVLYQILTHTDPNDETSADPEGQIMKAWAADPEYRKHVNVLYQILTNTDPNDESS 377 
WD40-rpts                                                               

1 WD40-repeats found in QUERY=EG_PF13_0010 (Len=377):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  2    88-136      5.18  328.72  0.00231       22.5%     18.95

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   88-136    QCEFACTNNTKTSLRKCAQTTTTSADPEGQIMKAWAADPEYRKHINVLY

   WD40 Template    TGE-----CLRTLSGHTSGVTSVSFSPDGKRLVSGSEDG----TIKVWD