Input parameters:

  Query = EG_PF13_0149 (Len=582)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (EG_PF13_0149, Len=582):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MLDILQEKNKIYDFKESYELNTPIENEVTENNYVDIQNERHIIWRKNTPFLYSSLLKHKLDWPSLTVEFLGGDNSFKSKL 80  
WD40-rpts                                                                                      

Query       81 NYFTNKVLLGTHTSNQDLEYVYIGEIKCPIFSIKEDVLQYENYSGFISNKKKKKGHPLPSFEVKAKLLHPGEVIRATNLP 160 
WD40-rpts                                                                         (____________

Query      161 SNSFFIVTQTSNGNALLFDYTKHPSFPSDMSTCYPQMILKGHTNEGSGLCWNVNRVYDSYKNPNIFDGYMEKVLYTGKED 240 
WD40-rpts      _WD 1_____________)             (_________________WD 2________________)         

Query      241 DSIKDIYSVKDMYSLKDTFSLKDTNSVEDIASSKDIQSVRGAYSIKELEAHNDLDIVNDLDTEESNDSISNSNTFGTEVN 320 
WD40-rpts           (_____________________WD 3____________________)       (_________________WD 

Query      321 TTNLLLASCSVDGSICLWDINKGTKSNDVPRTYGLNKSGKTADYNIKIYENTPTLSPLCTWYNKNTKTAFNDIFFHPKFS 400 
WD40-rpts      4_________________)                              (_____________________WD 5_____

Query      401 NALGVCDDNGYMSIYDIRKKNFFTKAEICFNDYNEPMNTFSFDNFSEYIFSCGYSDGLISVWDMRYNKESLLKLKYHTQG 480 
WD40-rpts      _______________)       (_________________WD 6_________________)    (____________

Query      481 INRIKFGMISSGIFASCSDDGTACIWDISRNNNTQILPLQKTEDDIYNNPNPVPKQLLFVHGGHIGSIYDLAWANSNTFT 560 
WD40-rpts      _____WD 7_________________)                           (_________________WD 8____

Query      561 IATVGVDNSIHVWHLNEQFLFQ 582 
WD40-rpts      _____________)        

8 WD40-repeats found in QUERY=EG_PF13_0149 (Len=582):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  5   148-179      4.54  302.31  0.00524       15.0%     42.81
  WD 2:  Seg  8   193-231      3.82  272.61  0.01312       10.0%     17.93
  WD 3:  Seg 12   246-292      5.52  342.55  0.00150       10.0%     24.76
  WD 4:  Seg 15   300-339      9.01  486.82  1.7e-05       25.0%     44.59
  WD 5:  Seg 19   370-416      6.34  376.71  0.00052       15.0%     53.73
  WD 6:  Seg 23   424-463      6.74  393.23  0.00031       22.5%     53.63
  WD 7:  Seg 27   468-507      8.12  450.11  5.3e-05       35.0%     52.27
  WD 8:  Seg 31   535-574      5.63  347.42  0.00129       17.5%     54.20

Multiple sequence alignment of 8 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  148-179    ----------------------LHPGEVIRATNLPSNSF-FI-VTQTSNGNALLFD
   WD 2  193-231    -CY------PQ-------MILKGHTNEGSGLCWNV-NRV-YD-SYKNPNIFDGYME
   WD 3  246-292    IYS------VKDMYSLKDTFSLKDTNSVEDIASSK-DIQ-SV-RGAYSIKELEAHN
   WD 4  300-339    LDT------EE-------SNDSISNSNTFGTEVNT-TNL-LL-ASCSVDGSICLWD
   WD 5  370-416    ENTPTLSPLCT-------WYNKNTKTAFNDIFFHPKFSN-AL-GVCDDNGYMSIYD
   WD 6  424-463    -TK------AE-------ICFNDYNEPMNTFSFDN-FSE-YIFSCGYSDGLISVWD
   WD 7  468-507    -KE------SL-------LKLKYHTQGINRIKFGMISSG-IF-ASCSDDGTACIWD
   WD 8  535-574    -KQ------LL-------FVHGGHIGSIYDLAWAN-SNTFTI-ATVGVDNSIHVWH

   WD40 Template    TGE------CL-------RTLSGHTSGVTSVSFSP-DGK-RL-VSGSEDGTIKVWD