Input parameters:

  Query = EG_PF14_0314 (Len=428)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (EG_PF14_0314, Len=428):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MKKLGNNLNTINDNNQNEESQHNYLGSNIDNYKYWQYNTILLYNVIMIYTCEWPSLFIEWLPKVYKNDEEYAYQDLILGT 80  
WD40-rpts                                                                                      

Query       81 YTTEKNNYILILEVTLPSEEFSYSSFYYEKINDYRHNFCNDTSKNFRIKNKIYHESEINKISCYPENADIVACFCSDGNI 160 
WD40-rpts        (_________________WD 1________________)           (_____________WD 2__________

Query      161 NIFNINDYYNKDDEDEIKNDNILTFDKTLKGHLYQGWGLEWDDKNNYISSCGDDSYLCIWDMNTSDKIMHPIVKYFNHNI 240 
WD40-rpts      ___)                      (_______________WD 3______________)       (___________

Query      241 PLQDCCWNDNNVLSVSENGHINIYDIRNKTVVNSICATNCTLNSIDVNPHNKNIFATAGTNKEIDLWDMRFTNKSLHRII 320 
WD40-rpts      _____WD 4_______________)   (_________________WD 5_________________)    (_______

Query      321 SQKETIIKLKWDKFQPGILSSSTSDKFIYFFDTNKIGIEQTYEDSQDGPPELIFIHGGHSSNILDYSLNNSYSMMISSIS 400 
WD40-rpts      __________WD 6_________________)(__________________________WD 7_________________

Query      401 EDNTLHIWQPSKQAYEDASDTYDDTEVE 428 
WD40-rpts      ________)                   

7 WD40-repeats found in QUERY=EG_PF14_0314 (Len=428):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  3    83-121      3.84  273.15  0.01290       12.5%     -21.17
  WD 2:  Seg  5   133-164      4.29  291.92  0.00723       17.5%     46.39
  WD 3:  Seg  8   187-221      7.44  421.89  0.00013       20.0%     49.38
  WD 4:  Seg 11   229-265      5.59  345.56  0.00137       17.5%     49.50
  WD 5:  Seg 15   269-308      6.86  397.87  0.00027       15.0%     51.49
  WD 6:  Seg 19   313-352      6.39  378.62  0.00049       15.0%     53.13
  WD 7:  Seg 23   353-409      5.93  359.50  0.00089       30.0%     54.62

Multiple sequence alignment of 7 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   83-121    -T----------------EKNNYILILEVTLPSEEFSY-SSF-Y-YEKINDYRHNFCND
   WD 2  133-164    -------------------------YHESEINKISCYPENAD-I-VACFCSDGNINIFN
   WD 3  187-221    ---------------------KTLKGHLYQGWGLEWDD-KNN-Y-ISSCGDDSYLCIWD
   WD 4  229-265    -M----------------HPIVKYFNHNIPLQDCCWND-N---N-VLSVSENGHINIYD
   WD 5  269-308    -K----------------TVVNSICATNCTLNSIDVNP-HNK-NIFATAGTNKEIDLWD
   WD 6  313-352    -N----------------KSLHRIISQKETIIKLKWDK-FQPGI-LSSSTSDKFIYFFD
   WD 7  353-409    TNKIGIEQTYEDSQDGPPELIFIHGGHSSNILDYSLNN-SYSMM-ISSISEDNTLHIWQ

   WD40 Template    TG----------------ECLRTLSGHTSGVTSVSFSP-DGK-R-LVSGSEDGTIKVWD