WDRR: WD40 Repeat Recognition
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JobID: 3CYCQ1683301679    Submitted: 2023-05-05 15:47:59

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Job status:  [Done] Total run time: 3336 seconds.    [Download result as txt]    [Query sequence in FASTA]
Input parameters:
  Query = Zm00001d017109_P001 (Len=182)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (Zm00001d017109_P001, Len=182):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MKANQTPQIDAPTLDPRSQGKVEAVTVHVTQKYFVSASKDNSWCFYDISTGSCLTQVGEASGQEGYTSASFHPDGLILGT 80  
WD40-rpts                                                                                      

Query       81 GTTDAVVKIWDLKAQSNIAKFEGHVGPVTVMSFSENGYFLATTAHDGVKLWDLRKLRNFRTFSPYDLDTPTNTVEFDFSG 160 
WD40-rpts                                                                                      

Query      161 NYLAIVGSDIIDIYRPHKTTTQ 182 
WD40-rpts                            



No WD40-repeats found in QUERY=Zm00001d017109_P001 (Len=182)!

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