Input parameters:

  Query = CsaV3_7G030710 (Len=433)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (CsaV3_7G030710, Len=433):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MTPPPTADRSSARRRSDVDAKPVHSLSHDILCIIFSFLDLFDLVRCLGVCKSWNYAIYKSEILRTFCLRYQKQEMNSAST 80  
WD40-rpts                                                                                      

Query       81 SEVSFSLEKPLLECLEEIAMERHKLALEKGRIRVSQWIGHSVRVEQCRMKMGLILTGVGDKVMRLWSPENFRCLEEYSVP 160 
WD40-rpts                                    (________________WD 1_______________)   (_________

Query      161 EKMPLVDFDFDVGKIVGLIGRQLCIWSRSGKRSIFPSRECTFEKGLCMRYFDAEAVVGCEDGTAHVFDMYSRRCSRIIRM 240 
WD40-rpts      _______WD 2_______________)  (_________________WD 3________________)   (________

Query      241 LPGPVTCLCVNDDQLMFGGSLLGNIGVSGVRSDQRVVMLRSRNTVGIRTLCYNASSRLVFAGSTAGHVYCWDLRTMKSLW 320 
WD40-rpts      ________WD 4________________)   (_________________WD 5_________________)   (____

Query      321 ESRVSPNVIYSLQHLQNDRSSLAVGGIDGILRILDQNTGTVQSCCMMDSRLLSTHQDGLGIVEERRGKRLSDETPIDTID 400 
WD40-rpts      _____________WD 6_________________)                                      (______

Query      401 RRNRPSITSLAVGMNKIVTTHNDKFIKLWKFQS 433 
WD40-rpts      __________WD 7_______________)   

7 WD40-repeats found in QUERY=CsaV3_7G030710 (Len=433):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  3   111-147      6.39  378.56  0.00049       15.0%     54.08
  WD 2:  Seg  7   151-187      4.25  290.14  0.00764       20.0%     54.89
  WD 3:  Seg 11   190-228      6.85  397.52  0.00027       25.0%     48.68
  WD 4:  Seg 15   232-269      7.20  411.90  0.00017       25.0%     53.50
  WD 5:  Seg 19   273-312      7.82  437.55  7.9e-05       20.0%     55.83
  WD 6:  Seg 23   316-355      7.51  425.07  0.00012       20.0%     54.84
  WD 7:  Seg 29   394-430      4.28  291.33  0.00736       17.5%     50.09

Multiple sequence alignment of 7 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  111-147    RIRVSQWIG-HSVRVEQCRM---KMGLILTGVGDKVMRLWS
   WD 2  151-187    FRCLEEYSV-PEK-MPLVDFDF-DVG-KIVGLIGRQLCIWS
   WD 3  190-228    GKRSIFPSR-ECTFEKGLCMRY-FDAEAVVGCEDGTAHVFD
   WD 4  232-269    RRCSRIIRM-LPGPVTCLCVND-D-QLMFGGSLLGNIGVSG
   WD 5  273-312    DQRVVMLRSRNTVGIRTLCYNA-SSRLVFAGSTAGHVYCWD
   WD 6  316-355    MKSLWESRV-SPNVIYSLQHLQNDRSSLAVGGIDGILRILD
   WD 7  394-430    TPIDTIDRR-NRPSITSLAV---GMNKIVTTHNDKFIKLWK

   WD40 Template    GECLRTLSG-HTSGVTSVSFSP-DGKRLVSGSEDGTIKVWD